Magnetospirillum gryphiswaldense MSR-1: MSR1_27330
Help
Entry
MSR1_27330 CDS
T05662
Symbol
dacF_2
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacF precursor
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MSR1_27330 (dacF_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mgry01002
]
MSR1_27330 (dacF_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgry01011
]
MSR1_27330 (dacF_2)
Enzymes [BR:
mgry01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MSR1_27330 (dacF_2)
Peptidases and inhibitors [BR:
mgry01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
MSR1_27330 (dacF_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
mgry01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
MSR1_27330 (dacF_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Flavodoxin_1
Beta-lactamase
Emfourin
Motif
Other DBs
NCBI-ProteinID:
AVM75203
LinkDB
All DBs
Position
2905342..2906577
Genome browser
AA seq
411 aa
AA seq
DB search
MPLLRHITGLVGRALMLMTILVLAPHTAHARDDRYASIVVDADNGNVLYAVNPDRRSYPA
SLTKVMTLYLLFDALEQGKLTLNSRMPVSAHATRQSPSKLNLKVGDRIDVEDAVLSLVTK
SANDVAVVVAEAIGGSEDDFAEMMTRKARQLGMSSTTYRNASGLPDMGQISTPRDQATLA
RALVKHHGRYYHYFSTRQFNWQGQPISTHNRLMLRYQGADGIKTGYINASGFNLIASAKR
DGKRIVGVVFGGNTAGWRDNNMAQILDKGFARLGRGTEMRSAAIEEEDRADLDKLIASAA
SEPTNKGSNTARASFKAPAADQDVGDADPDSWGIQVGAFGDYKTSHKAASTAAKKLGALV
SVATVDVAKAKSGKQVVYRSRLTGFTEDQARAACKRLTKAKQACKVVQPTA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgccattgctccgtcacatcaccggcttggtgggtcgcgccttgatgctgatgaccatt
ttggtcttggctccgcacactgcccatgcccgcgacgatcgctatgcgtccatcgtcgtc
gatgccgataacggcaatgtgctttatgccgtcaatcccgatcgccggtcctaccccgcc
tcgttgaccaaggtgatgacgctgtaccttttgtttgacgcgcttgaacagggcaagctg
accttgaattcgcgcatgccggtgtcggcccatgccacccgtcagtcgccgtcgaaattg
aacctgaaagtgggcgaccgtatcgacgtggaagacgcggttttgtcgctggtaaccaag
tcggccaatgacgtcgccgtggtggtggcggaagccatcggcggcagcgaggacgacttc
gccgagatgatgacccgcaaggcccggcaattgggcatgagctcgaccacctaccgcaac
gcctcgggtttgcccgacatggggcagatttcgacgccgcgcgatcaggccaccctggcc
cgcgccctggtcaagcaccatggccgctattaccactatttctccacccgccagttcaac
tggcagggtcagcccatcagcacccataaccggttgatgctgcgctatcagggcgccgac
ggcatcaagaccggctatatcaacgcctcgggcttcaatctgatcgcctcggccaagcgc
gacggcaagcgcatcgtcggcgtcgtctttggcggcaataccgccggttggcgtgacaac
aacatggcgcagattctcgacaaaggtttcgcccggctgggtcgcggtaccgaaatgcgg
tccgccgccatcgaggaagaagaccgcgccgatctggacaagctgatcgccagcgccgcc
agtgaacccacgaacaagggcagcaataccgctcgggcatcgttcaaggccccggcggcg
gatcaggatgtgggggacgccgatcccgattcctggggcatccaagtcggcgccttcggc
gattataagacttcccacaaggccgccagcaccgccgccaagaaattgggtgccctggtt
tccgtcgccaccgttgacgtggccaaggccaaatccggcaagcaggtggtttatcgctcg
cgcctgaccggtttcaccgaggatcaggcccgcgccgcctgcaagcggctgaccaaggcc
aagcaagcctgcaaggtggttcagcccaccgcctga
DBGET
integrated database retrieval system
