Magnetospirillum gryphiswaldense MSR-1: MSR1_27340
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Entry
MSR1_27340 CDS
T05662
Symbol
lpd3
Name
(GenBank) Dihydrolipoyl dehydrogenase 3
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00010
Glycolysis / Gluconeogenesis
mgry00020
Citrate cycle (TCA cycle)
mgry00260
Glycine, serine and threonine metabolism
mgry00280
Valine, leucine and isoleucine degradation
mgry00310
Lysine degradation
mgry00380
Tryptophan metabolism
mgry00620
Pyruvate metabolism
mgry00630
Glyoxylate and dicarboxylate metabolism
mgry00640
Propanoate metabolism
mgry00670
One carbon pool by folate
mgry00785
Lipoic acid metabolism
mgry01100
Metabolic pathways
mgry01110
Biosynthesis of secondary metabolites
mgry01120
Microbial metabolism in diverse environments
mgry01200
Carbon metabolism
mgry01210
2-Oxocarboxylic acid metabolism
mgry01240
Biosynthesis of cofactors
Module
mgry_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mgry_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mgry_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mgry_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MSR1_27340 (lpd3)
00020 Citrate cycle (TCA cycle)
MSR1_27340 (lpd3)
00620 Pyruvate metabolism
MSR1_27340 (lpd3)
00630 Glyoxylate and dicarboxylate metabolism
MSR1_27340 (lpd3)
00640 Propanoate metabolism
MSR1_27340 (lpd3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MSR1_27340 (lpd3)
00280 Valine, leucine and isoleucine degradation
MSR1_27340 (lpd3)
00310 Lysine degradation
MSR1_27340 (lpd3)
00380 Tryptophan metabolism
MSR1_27340 (lpd3)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MSR1_27340 (lpd3)
00670 One carbon pool by folate
MSR1_27340 (lpd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgry04147
]
MSR1_27340 (lpd3)
Enzymes [BR:
mgry01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MSR1_27340 (lpd3)
Exosome [BR:
mgry04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MSR1_27340 (lpd3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
FAD_binding_2
GIDA
NAD_binding_8
DAO
FAD_binding_3
AlaDh_PNT_C
Thi4
Lys_Orn_oxgnase
Amino_oxidase
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AVM75204
LinkDB
All DBs
Position
complement(2907079..2908485)
Genome browser
AA seq
468 aa
AA seq
DB search
MSENSFDVVIIGGGPGGYVAAIRAGQLGLKTAIIEKRGALGGTCLNVGCIPSKALLAASH
AYEAASHEYAAFGVKIGKVEIDVAGMMSHKDKVVSDNTKGIEFLMKKNKVTYLIGAGEIT
GAGTVKVTGKDGEQVVTAKAIIIATGSDVTPLPGVEIDEEVIVSSTGALKLDKTPKSMVV
IGGGVIGLELGTVWRRLGAKVTVVEFLDKILPTNDGEVSKTMQKILAKQGMDFKLGTKVT
KAEKKGKGVTLTVEPAAGGTAEEIKADVVLVAIGRKPYTDGLGLENVGIEKDARGFIKVD
HYFRTNVPGVFAIGDVIGGAMLAHKAEEEGVALAELLAGEHGHVNYDVIPGVVYTWPEVA
AVGKTEEQLKAEGIAYNAGKFPFSANGRARSMNETEGFVKVLACAATDRVLGAHIVGPNA
GDLLAEMVMAMEFGASAEDVARTCHSHPGLGEAVKEACLAANKRALHT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacagcttcgacgtcgtcatcatcggtggcggccccggcggttacgtcgcc
gccatccgtgccggccagttgggcctgaagaccgccatcatcgaaaagcgcggcgccctg
ggcggcacctgcctgaacgtcggctgcatcccgtccaaggccctgctggcggcctcgcac
gcctatgaagcggccagccacgaatatgcggccttcggcgtcaagatcggcaaggtggaa
atcgacgtcgccggcatgatgtcgcacaaggacaaggtggtcagcgacaacaccaagggc
atcgagttcttgatgaagaagaacaaggtgacctacctgatcggcgccggcgaaatcacc
ggggccggcaccgtcaaggtgaccggcaaggacggcgagcaggtggtgaccgccaaggcc
atcatcatcgccaccggttccgacgtcacccccttgccgggtgtcgagatcgacgaggag
gtgatcgtttcctccaccggtgcgctgaagctggacaagaccccgaagagcatggtggtc
atcggtggcggcgtcatcggcctggaactgggcactgtgtggcggcgtctgggcgccaag
gtcaccgtggtcgagttcctcgacaagatcctgccgaccaatgacggcgaagtgtccaag
accatgcagaagatcctggccaagcagggcatggacttcaaactgggcaccaaggtgacc
aaggcggagaagaagggcaagggcgtgaccctgacggtggaacccgccgccggcggcacg
gctgaagagatcaaggccgacgtggtgctggtggccatcggccgcaagccctacaccgat
ggtctgggcctggaaaatgtcggcatcgagaaggatgcgcgcggcttcatcaaggtcgac
cattacttccgcaccaacgtgcccggcgtcttcgccatcggtgacgtcatcggtggcgcc
atgttggcccacaaggcggaggaagagggcgtcgccctggccgagctgctggccggtgaa
cacggtcacgtcaattacgacgtcatccccggtgtggtctacacctggccggaagtggct
gccgtcggcaagaccgaggaacagttgaaggccgagggcatcgcctacaatgccggcaag
ttcccgttctcggccaatggccgggcgcggtccatgaacgagaccgaaggcttcgtcaag
gtgctggcctgcgccgccaccgaccgcgtgctgggcgcccacatcgtcggccccaatgcc
ggcgacctgttggcggaaatggtcatggccatggaattcggcgcttccgccgaggacgtg
gcgcgtacctgccactcgcatcccggtttgggcgaagcggtgaaggaagcctgcctggcc
gccaacaagcgcgccttgcatacctaa
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