KEGG   Magnetospirillum gryphiswaldense MSR-1: MSR1_27420
Entry
MSR1_27420        CDS       T05662                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
mgry  Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00300  Lysine biosynthesis
mgry00470  D-Amino acid metabolism
mgry01100  Metabolic pathways
mgry01110  Biosynthesis of secondary metabolites
mgry01120  Microbial metabolism in diverse environments
mgry01230  Biosynthesis of amino acids
Module
mgry_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mgry00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MSR1_27420 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MSR1_27420 (dapF)
Enzymes [BR:mgry01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     MSR1_27420 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AVM75212
LinkDB
Position
complement(2918797..2919639)
AA seq 280 aa
MTDTTDHPFLKMHGLGNDFVVVDVRRSGFVLTPAMARAIADRRTGLGCDQVVVIETARSG
LSDAWMSLWNADGSVTSACGNATRCVAWLLMQQAGSDHAVIETKAGLLDAEMRGDKLVAV
DMGPARLDWREIPLAKPVDTLHMGIGIGSLTDPVGVSMGNPHAVFFVDDVAAIDLAALGP
VLEHHDLFPERANIEVAQVLAPDRIRMRVWERGTGITSACGTGACATLVAAARRGLTARK
ADVVLDGGVLTIEWLPDDHVMMTGPVALVAEGRLHSSLLS
NT seq 843 nt   +upstreamnt  +downstreamnt
atgactgataccactgaccaccccttcctgaagatgcatggcttgggcaacgatttcgtt
gtcgtcgacgtgcgccgatccggctttgtcctcaccccggccatggcccgcgccatcgcc
gatcgccgcaccggcttgggctgtgatcaggtggtggtgatcgagacagcgcgctccggc
ctgtccgacgcctggatgagtctgtggaacgccgacggctcggtcacctcggcctgcggc
aacgccacccgctgcgtcgcctggctgctgatgcaacaggccggcagcgatcatgcggtc
atcgaaaccaaggctggcctgctggatgccgaaatgcgcggcgacaagctggtcgccgtc
gacatggggccggcgcggctggactggcgggaaatccccctggccaagccggtcgacacc
ttgcatatgggcatcggcatcggttccctgaccgacccggtcggtgtcagcatgggcaat
ccgcacgcggtgttcttcgtcgacgacgtcgccgccatcgatctggccgccctcgggccg
gtgctggaacatcacgatctattccccgaacgggccaatatcgaagtcgcccaggtgctc
gcccctgaccgcatccgcatgcgggtgtgggagcgcggcaccggcatcaccagtgcctgc
ggcaccggcgcctgcgccaccctggtcgccgccgcccgccgcggcctgacggcgcgcaag
gccgacgtggtgctggatggcggcgtgctgaccatcgaatggctgcccgacgaccatgtg
atgatgaccgggccggtggcgctggtggcggaagggcggctgcattccagcttgctgtca
tga

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