Magnetospirillum gryphiswaldense MSR-1: MSR1_27840
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Entry
MSR1_27840 CDS
T05662
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgry03016
]
MSR1_27840 (truB)
Enzymes [BR:
mgry01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSR1_27840 (truB)
Transfer RNA biogenesis [BR:
mgry03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSR1_27840 (truB)
Prokaryotic type
MSR1_27840 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AVM75254
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All DBs
Position
2963490..2964455
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AA seq
321 aa
AA seq
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MARKRKGIPIDGWLAIDKPVGIGSTQVVSIVRRTLNAAKVGHGGTLDPLADGILPIALGE
ATKTVQWVMDGAKTYRCTICFGQARSTDDLEGEVIATSDVRPSAQAINDILPRFTGDISQ
VPPIFSAIKVAGERAYDLARAGEQVDLKARVVTIHGLTVLGMPDADHVDLEVRCGKGTYI
RSLARDLAVALGSVGHITRLRRRACGPFTEQNAISLDKFTTLGHLPALRAYLLPIETALD
DIPALALTAAEARRLHSGQVLAIGQLADRDALPALPRNLTVRAMDGNRLVALACCDGTEV
RSLRVINLQPSHAGEDDVDYA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaagcgcaaaggcattcctatcgacggctggttggccatcgacaagccggtg
ggtatcggttcgacccaggtggtgtccatcgtccggcgcaccttgaacgcggccaaggtc
ggtcatggcggcacccttgacccgttggccgacggcatcctgcccatcgccctgggcgag
gcgaccaagacggtgcaatgggtgatggatggggccaagacctatcgctgcacgatttgc
tttggtcaggcccgttccaccgacgacctggaaggcgaggtcatcgccacctccgacgtg
cggccctcggcccaggccatcaatgatattctgccgcgcttcaccggcgatatttcccag
gttccccccatcttttccgccatcaaggtggcgggtgagcgcgcctatgatctggcccgc
gccggcgagcaggtggacttgaaggcgcgtgtggtcactatccatggcctgaccgtgctg
ggcatgcccgatgccgatcatgtggacttggaagtccgctgcggcaagggcacctatatc
cgctcgctcgcccgcgacctggcggttgccttgggaagcgttggccatatcacccggttg
cggcggcgggcctgcggcccgttcaccgaacaaaacgcgatttccctggacaaattcacc
actctggggcaccttcccgcccttcgggcatatctgcttccgatcgagaccgcgctggac
gacatcccggcgctggccctgacggcggcggaggcccggcgtctccacagcggtcaggtt
ctggccatcggccaattggctgaccgcgacgcactgcccgccctgcccaggaatctcacg
gttcgggccatggacggaaacaggctggtggcgctggcgtgttgcgacggcactgaagtc
cgatcgctgcgcgttatcaatctccaaccatctcatgcaggagaagacgatgtcgattac
gcctga
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integrated database retrieval system
