Magnetospirillum gryphiswaldense MSR-1: MSR1_29370
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Entry
MSR1_29370 CDS
T05662
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MSR1_29370 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_29370 (mutS)
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MSR1_29370 (mutS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_27
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AVM75404
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Position
complement(3108589..3111234)
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AA seq
881 aa
AA seq
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MTEPTIPADATPMMAQYLAIKHAHPDCLLFYRMGDFYELFFDDAVKAAAALDIALTKRGK
HLGEDIAMCGVPVRSYEAYLSRLVRAGYKVAIGEQTEDPAEAKKRGAKSVVSRDVVRVIT
AGTLTEDNLLDARSHNYLAALAEAGGGLGLAWVDVSTGDFAMQPLAPPLLSAALARLDPG
ELLVPERLLNQPDLLEAWSEWKTILTPLPSVRFDSENSRRRLEALYGVGALDAFGAFGRA
ELAAGGALVDYIELTQKGKLPRLNPPQRLAQGAVMEIDGATRRNLELAETLTGERKGSLL
ATIDRTVTGAGARLLAAHLAAPLTDPAAIDRRLDAVAFFVEHEDVREAVRAALKRCPDIE
RALSRLSLGRGGPRDLAAIRDALAEIPSLRGLIARPALDAPPPAIAQATQGLGEHSTLVD
ILTRALAEELPLLARDGGFIRPEFHAGLDELKSLKAEGNAHLMRLERRYAEETGIQALKI
RHNNIIGHHIEVPAKQADKLDENFIHRQTMANAARYTTTELIELAGKLTGAADRALAMEQ
HLFSQLVGEVTGRAHDIADAAASLAALDVAAALAELASAENWARPVVDDSHAFVIDGGRH
PVVEAALRAVNHSAFVANDCDLSAGNRLWLITGPNMAGKSTFLRQNAVIAILAQMGAFVP
ARAARIGVVDRLFSRVGAADDLARGRSTFMVEMVETAAILNQSGPRALVILDEIGRGTAT
FDGLSIAWSVVEHLHEVNRCRALFATHYHELTSLSGRLRDLSCRQMRVKEWQGDVVFLHE
VAQGAADRSYGIHVGRLAGLPPAVVARAEEVLSALEKGEQGSAVAKLADDLPLFAALAKP
KPKESVAAEPSPLAEKLKEINPDELSPRQALDLLYDLKRLL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaccgaccatccccgccgatgccacgccgatgatggcccaatacctggccatc
aaacacgcccatcccgattgcctgctgttctatcgcatgggcgatttctacgaattgttc
ttcgacgacgcggtcaaggcggcggcggccctggatatcgcgctgaccaagcgcggcaag
catctgggtgaggacatcgccatgtgcggcgtgccggtacggtcgtacgaggcctatctg
tcgcggctggtgcgcgccggctacaaggtggccatcggcgaacagaccgaagacccggcg
gaagcgaagaagcgcggcgccaaatcggtggtgtcgcgcgacgtggtccgcgtcatcacc
gccggcaccctgaccgaggacaatcttctcgatgcccggtcgcacaattatctggccgcc
ctggccgaggcgggcggcgggttggggctggcctgggtcgatgtctccaccggcgatttc
gccatgcagcccttggccccgcccttgctgtccgccgccctggcccggcttgatccgggc
gaattgttggtgcccgaacggctgctcaaccaaccggacctgcttgaggcgtggagcgag
tggaaaaccatcctgacgccgctgcccagcgtccgtttcgattccgaaaattcccgcaga
cggcttgaggccttgtatggcgttggcgcccttgacgctttcggtgccttcggtcgggcc
gaactggccgccggcggcgccctggtcgattacatcgagctgacgcaaaagggcaagctg
ccgcgtctcaacccgccgcagcgtctggcccagggcgcggtgatggaaatcgatggcgcc
acccgtcgtaacctggaactggcggaaaccctgaccggcgagcgcaagggatcgctgctg
gcgaccatcgaccgcacggtgaccggggcgggggcgcggctgctggcggcacatctggcc
gcacccttgaccgatccggcggccatcgatcgccgcctggacgcggtggccttcttcgtc
gagcatgaagacgtgcgcgaggccgtgcgcgccgccctgaagcgctgccccgacatcgag
cgcgccctgtcgcgcctgagcctggggcgcggcggtccacgcgatctggccgccatccgc
gacgccctggcggaaatcccgtccttgcgcggtctgatcgcgcggccggccctggatgcg
ccgccgccggccattgcccaggcgacccagggattgggggaacattccaccctggtcgac
atcctgacccgcgccttggccgaggaattgccgcttctggcccgcgacggcggcttcatc
cgccccgagttccatgccggcctggatgaactgaaaagcctgaaggccgagggcaacgct
catctgatgcggttggaacggcgctatgccgaggaaaccggcatccaggccctgaaaatc
cgccacaacaacatcatcggccatcatatcgaggtgccggccaagcaggcggacaagctg
gatgaaaatttcatccaccgccagaccatggccaatgcggcgcgctacaccaccaccgaa
ctgatcgaactggccggcaagctgaccggcgccgccgatcgtgccttggccatggaacag
cacttgttcagccaattggtgggcgaggttaccgggcgcgcccatgacatcgctgatgcc
gccgccagcctggctgccctcgacgtggctgcggccctggccgaactggcgtcggcggaa
aactgggcacggcccgtggtcgacgacagtcatgccttcgtcatcgacgggggccgtcat
ccggtggtggaagccgccttgcgtgcggtcaaccacagcgccttcgtcgccaatgattgc
gatctgtcggcgggtaaccgcctgtggctgatcaccggccccaacatggccggtaaatcc
accttcctgcgccagaacgcggtcatcgccatcctggcgcagatgggcgccttcgtcccg
gcccgggccgcccgtatcggcgtggtcgaccgtttgttttcccgcgtcggcgccgccgac
gatctggcgcggggacggtccaccttcatggtggaaatggtggaaaccgccgccatcctc
aaccagtccggcccacgcgccctggtgattttggacgagatcgggcgcggcaccgccact
ttcgacggtctctccatcgcctggtcggtggtcgagcatctgcacgaggtgaacagatgc
cgtgccctgttcgccacccattaccacgagctgaccagcctgtcggggcggctgagggat
ctgtcgtgtcggcagatgcgggtgaaggaatggcaaggcgacgtggtcttcctgcacgaa
gtggcgcaaggcgccgccgaccgctcgtacggcattcatgtgggccggctggccgggctg
ccgccagccgtcgttgcgcgagcggaagaagtcttgtcggctctggaaaagggcgaacag
ggtagcgccgtggccaaattggccgatgatttgccgctgttcgccgccctggccaaaccc
aagcccaaggagagtgtggcggcggagccgtcgccgctggcggaaaagctgaaggaaatc
aatcccgacgagctcagtccgcgccaagccctggatctgctttacgacctgaaacggtta
ctgtga
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