Magnetospirillum gryphiswaldense MSR-1: MSR1_29450
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Entry
MSR1_29450 CDS
T05662
Symbol
pbpF_1
Name
(GenBank) Penicillin-binding protein 1F
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00550
Peptidoglycan biosynthesis
mgry01100
Metabolic pathways
mgry01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MSR1_29450 (pbpF_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MSR1_29450 (pbpF_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mgry01003
]
MSR1_29450 (pbpF_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgry01011
]
MSR1_29450 (pbpF_1)
Enzymes [BR:
mgry01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
MSR1_29450 (pbpF_1)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MSR1_29450 (pbpF_1)
Glycosyltransferases [BR:
mgry01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
MSR1_29450 (pbpF_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
mgry01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
MSR1_29450 (pbpF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AVM75412
LinkDB
All DBs
Position
3118448..3120529
Genome browser
AA seq
693 aa
AA seq
DB search
MTTKRPPELIVDPADRLRSSSESEPPPPRQPKGQKPTPPPRQPKRKPAAGKKRGWGKRLV
MWGATLAVWAGIAVAGLVAYYAHDLPDIDKVTAPTRRPSIQFVSADGQVFAAFGDLYGES
LDLAEIAPAIAQAVLATEDRRFFSHFGVDIFGLARAAWANLRAGHVVQGGSTITQQLAKN
LFLTPDRTMKRKVQEVLMALWLERRFTKQQLLTLYLNRVYLGSGAYGVDAAAKRYFDVSA
RRVSPYQAAVIAGLLKAPSRYSPLNSPEASHKRAVEVLGNMVEAGYMDQRSAEMAALGGA
AQAVKRAAPAGRYFADWALSRLDGISEVAGRDVVVRTTLDLALQRKVEAQVQALLSGPGA
KANVSQGAVVVLTPDGAIRALTGGKDYDDSQFNRATQALRQPGSAFKPFVYLTAMEQGLA
PQDVYDDAPVKLGNWSPGNYNGRFEGQVTLRHAFANSTNTVAVRLIDDVGPGRVVATAHK
LGITSDLGRDASLALGTSETTLLELTQAYAPFANGGYGITAHGIESITTPDGQVLWSRQG
GGVGKVMSDQALAHMHEMMSAVIGEGTGKAARLDRPAGAKTGTTQDYRDAWFMGFTADYV
TGVWLGNDDQRNEMKKVTGGGLPAQLWKSVMMAAHQGLPVHALPTPDLTPSTMADTEGTA
GGMVVGGNEGSGGDPVRAIGNAIDDLLGSIFGR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaccactaagcgcccccccgaactgatcgtcgatcccgctgaccgcctgcgttccagc
agcgagtccgagccgccgccgccgcgccagcccaaaggacaaaagcccactccgccgccg
cgccagcccaaacgcaaaccggcggcaggcaaaaagcgcggctggggcaaacggctggtg
atgtggggcgccaccttggcggtgtgggcgggcatcgccgtggcgggattggtcgcctat
tacgcccacgatctgcccgacatcgacaaggtgacggcgccgacccggcggcccagcatc
cagttcgtttccgccgatggtcaggtgttcgccgccttcggcgatctttacggcgaatcc
ctggacttggccgagatcgcgcccgccatcgcccaagcggtgttggccaccgaggaccgt
cgcttcttcagtcatttcggtgtcgatatttttggtctggcccgcgccgcctgggccaat
ctgcgggccgggcacgtggttcagggtgggtcgaccatcacccagcaattggccaagaac
ctgtttctcacccccgaccgcacaatgaagcgcaaggtccaggaagtgctgatggcgctg
tggctggaacggcgcttcaccaagcagcaattgctgaccctttacctcaaccgggtttat
ctgggctcgggcgcttatggcgtcgacgccgcggccaagcgttatttcgacgtttccgcc
cgccgggtcagcccctatcaggcggcggtgatcgccggcctgttgaaggcgcccagccgc
tattcaccgctgaacagccccgaagccagccacaaacgtgcggtcgaggtcttgggcaac
atggtcgaagccggttatatggaccaacgcagcgccgagatggccgccttgggcggtgcc
gcccaggcggtgaagcgcgcggcccctgccgggcgttacttcgccgattgggcgttaagc
cgtctggacggcatcagcgaagtggcgggccgcgacgtggtggtgcgtaccaccttggat
ctggccctgcaacgcaaggtcgaagcccaggtgcaggcgctgttgagcggccccggcgcc
aaggccaacgtctcccagggagcggtggtggtgctgacccccgacggcgccatccgggcg
ctgaccggcggcaaggattatgacgacagccagttcaaccgcgccacccaggcgttgcgc
caacccggttcggccttcaagcccttcgtctacctgaccgccatggagcagggtctggcc
ccccaggacgtctatgacgacgctccggtgaaattgggcaattggtcgccgggcaattac
aacgggcgcttcgaggggcaggtcaccctgcgccatgccttcgccaattccaccaacacg
gtggcggtgcggctgatcgacgatgtggggccgggccgggtggtggccaccgcccacaag
ctgggcatcacctcggatctgggccgcgatgcgtccttggccttgggcaccagcgagacc
accttgctggaactgacccaggcctatgcccccttcgccaatggcggctatggcatcacc
gcccacggcatcgagtccatcaccacccccgacggtcaggtgctgtggagccgccaaggc
ggcggcgtcggcaaggtgatgtccgatcaggccctggcccatatgcacgagatgatgagc
gcggtgatcggcgaaggtaccggcaaggcggcacggctggatcgccccgccggggccaag
accggcaccacccaggattaccgcgacgcttggttcatgggcttcaccgccgattacgtc
accggcgtgtggctgggcaacgacgaccagcgcaacgagatgaagaaggtcaccggcggc
ggattgccggcccaattgtggaaaagcgtgatgatggccgcccatcaggggctgccggtc
catgccctgcccacccccgatctgacgccgtcgaccatggccgataccgaaggcaccgcc
ggcggcatggtggttggcggcaatgagggcagcggcggcgatccggtgcgggccatcggc
aacgccatcgatgacctgttgggcagtatcttcgggcgctga
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