Magnetospirillum gryphiswaldense MSR-1: MSR1_29750
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Entry
MSR1_29750 CDS
T05662
Symbol
cbhB
Name
(GenBank) Exoglucanase B precursor
KO
K20276
large repetitive protein
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSR1_29750 (cbhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
DUF4347
Big_3_5
Big_3_3
Y_Y_Y
Big_7
TOBE
Motif
Other DBs
NCBI-ProteinID:
AVM75442
LinkDB
All DBs
Position
3148449..3153998
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AA seq
1849 aa
AA seq
DB search
MPHVAKSPRSSAARARRQAPPNGLLPLALEPRIMFDGAAVADMADHAADTAADNRDATVE
PAPSSVTERREVAFIDTGVAGYQSLLDGIAAGTEVVLITGGDSGLAQMAQWAESHSGYDA
IHVFSHGADGVLVLGSDTIDAAALSQSGIQAGLAALGQALSTDGDLMLYGCDVAAGEVGR
SFIANLAAATGADVAASDDATGRGGDWTLEERAGTVETASLASSAYAGTLSIDNVDIQIG
GGSVWGVVAIGDGVEFFLDTYDNQSTTTLSNLYFDVNASTKRITLTLKNGYPFNDGVTGF
DLVFSGTNLDKITSVTRSDDSTSTASVSAAATGNDKIITFTVVNQTSGNGVIVWDFNFSN
TGPTGPTTTVSTASLSADTGSSSSDWITGTASQTVSGTLSANLGAGEKVEVSYDGGSTWS
DATTYTQGSTAWSTTTTLAGANTFQARVTDTNGSSTAYSHTYTLDSSAPSAPSAPDMTAG
TDSGTNTDNITSDTTPTFSGTAEANAIVKLYDTDGSTEIGSVTADGSGNWTITTSVLSAG
AHTITAKATDTAGNQSAASTGLSVTIDTAAPAAPSTPDMTAGTDSGSSSTDNITSDTTPT
FSGTAEANATVKLYDTDGTTEIGSATADGSGNWTITVSTLSAGAHTITAKATDVAGNQDV
ASGGLSVTIDTAAPAAPSAPDMSAGSDSGTNTDNITTTTTPTFTGTAEANATVTLYDTDG
STVLGTGTADGSGNWSITASTLSAGAHTLTAKATDAAGNQGVASTGLSVTIDTTAPAAPT
ALTISSDTGNSATDGITSDTTLTIGGSAEANASVEVFKDGVSIGTTTANGAGAWSFDYTG
TTLTEGSYAFTAIATDVAGNVGTASTTKAVTVDTTAPAVPAVTAISSDTGVDGADAITTD
TTLVISGTAAANITVEVFKDGVSIGTTTADGTGAWSFDHTGTTLALATHAFTAKAQDSAG
NASAASTALNVQVVAGPAAPTGLAISTDSGSSNSDGKTTDTTLILTGSAPANATVLVYRD
GVSIGTTTADGTGAWTYDYTGTTLAEGTYAFTAVSRLLGQDSAASTAKTVVVDTTAPAAP
SALTISSDTGNSATDGITSDTTLTIGGSAEANASVEVFKDGVSIGTATADGTGAWSFDYT
GTTLAEGSYAFTAIATDVAGNVGTASTAKAVTVDTTAPAVPAVTAISTDTGTSGSDAITT
DQTLVISGTATANITVEVFKDGASIGTTTADGTGAWSFDHTGTTLALATYAFTAKAQDSA
GNASAASTALSVQVVVAPAAPTGLAISTDSSGSSNSDGITSDTTLIVSGTAPLNATVTIY
KDGVSIGTATADGTTGAWSFDHTGTTLAAGAHVFTAKATLNGQDSAVSSALNVTVDTTAP
SAPAVTAISSDTGSSHSDGITIDTGLTISGTAEANATVEVFKDGVSIGTTTADGAGAWSF
DHSGTTLALGNYAFTAKAKDAAGNESAASTSLSVRVTIDDTAPGAPSLAATGGTSTTVPV
TGTAEAEATVKIYDGATLLGTVTVDEDGNWTYTATLAVGSHTLTATATDAAGNVSVASAP
ATVTITAVVGSPSNDTGSGRNENGDDTAPKPGPIIDTTPVAPLVTIVRDTGTGTGGFGAD
AGGNLGGGLGGGLGGATTGTGTGAITSVVGDGLTRPGGNSFQVALAGRSAGGGDALVINA
PMRDAIVAEGTRISVTIPADTFAHTKADAVVSLTATRANGAALPGWMAFNPSTGTFEGTP
PPGFRGEVVVRVIARDNDGRQVVQTFKIVVGQGQGNAAPAEGGQGGGGRDGGQGEGQGQG
GPQAPGRTGDASPFGRPGLTAQLRALGQDGQATKQAVLFNALKTSGKAA
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgtcgccaaatcccctcgctcctccgccgctcgcgctcgccgtcaggcgcca
ccgaatggattgctgccgctggccttggagccccggatcatgttcgacggcgcggcggtg
gccgatatggccgatcatgctgcggataccgccgcggacaaccgcgacgcgacggttgaa
ccggcgccttcatcggtgaccgagcgacgggaagtggcgtttatcgacaccggtgttgcc
ggctaccaatcgttgctggacggcattgccgccggaaccgaggtggtgctgatcaccggc
ggtgacagcggactggcccagatggcccagtgggcggaaagccattccggctatgatgcc
atccacgttttcagccatggtgccgatggcgttctggtcctgggctcggacaccatcgac
gccgccgccctgtcgcagagcggtattcaggcaggacttgccgccttgggccaggctctg
tcgaccgatggcgatctgatgctgtatggctgcgacgtggcggcgggtgaggtggggcga
agcttcatcgccaatctggccgcagccaccggcgcggatgtggccgcctccgacgacgcc
accggacgcggcggcgactggactttggaagagcgcgccggcaccgtcgagaccgcatcg
cttgcgtcctcggcttatgccgggactctctccatcgataatgtcgatattcagataggt
gggggctcggtttggggcgtcgtcgccatcggagatggcgtcgagttttttcttgacacc
tacgacaaccaaagcacgacgacattatcaaatctgtatttcgatgttaatgcatcgaca
aagcgcatcacgttgacgctcaagaatggctaccccttcaatgacggcgtaaccggattc
gacctcgtcttttccggcaccaacctcgataagatcaccagtgtcacccgaagcgatgac
agcaccagtaccgccagtgtcagtgcggcagcgacgggtaatgacaagatcatcaccttc
accgttgtcaaccagacatccggcaatggcgtgatcgtttgggatttcaatttcagcaat
acgggtcccaccggtcccaccaccaccgtttccaccgcgtccttgtccgccgacaccggc
agcagttcgtcggattggatcaccggaacggcgtcgcagaccgtcagcggtacgctcagc
gccaatttgggtgccggcgaaaaggtcgaggtgtcctatgacggcggctccacctggagc
gatgccaccacctatacccagggctccaccgcgtggtcgaccaccaccacgctggccggg
gccaacacgttccaggcgcgggtgaccgataccaacggcagcagcaccgcctatagccat
acttatacgttggatagcagtgcgccatcggcgccgtcggcgccggacatgaccgccggc
accgatagcggcaccaataccgacaacatcaccagcgacaccacgccgaccttcagcggc
acggccgaggccaatgccatcgtcaagctgtacgacaccgacggcagcacggaaatcggg
tcggtcaccgccgacgggtcgggcaattggaccatcaccacctcggtcctgtcggcgggg
gcgcataccatcaccgccaaggccaccgacacggcgggcaaccagagcgccgcgtccacc
gggttgtcggtgaccatcgacaccgccgcgccggccgcgccgtcgacgccggacatgacc
gccggcaccgatagtggttcgtccagcaccgacaatatcaccagcgacaccacccccacc
ttcagcggcaccgccgaagccaatgccaccgtcaagctgtacgacaccgacggcaccacg
gaaatcgggtcggccaccgccgatgggtcgggcaattggaccatcaccgtgtcgaccttg
tcggcgggggcgcacaccatcaccgccaaggccaccgatgtcgccggcaaccaggacgtc
gcctcgggcgggctgtcggtgaccatcgacaccgccgcgccggccgccccctcggccccg
gacatgagcgccggcagcgacagcggcaccaataccgacaacatcaccaccaccaccacc
cccacctttaccggcacggccgaagccaacgccacggtgaccctgtacgacaccgacggc
agcaccgtgctgggcaccggcaccgccgacgggtcgggcaattggtcgatcaccgcctcg
acgttgtcggcgggggcgcacaccctcaccgccaaggctaccgatgcggcgggcaaccaa
ggcgttgcctcgaccgggttgtcggtgaccatcgataccaccgcgccggcggcgccgacg
gccttgaccatcagcagcgacactggcaactcggccaccgacggcatcaccagcgacacc
accttgaccatcggcggcagcgccgaggccaatgcctcggtcgaggtgttcaaggacggg
gtgtccatcggcaccaccaccgccaacggcgctggcgcctggagcttcgattacaccggc
accaccctgaccgagggcagctatgccttcaccgccatcgccaccgacgtggccggcaat
gtcggcaccgcctcgaccaccaaggcggtgacggtggataccaccgcgccggcggtgccg
gcggttaccgccatctccagcgataccggcgtcgatggcgccgacgccatcaccaccgac
accaccttggtaatcagcggcacggcggcggctaatatcaccgtcgaagtgtttaaggat
ggggtgtccatcggcaccaccaccgccgacggcaccggcgcctggtctttcgaccacacc
ggcaccaccttggccctggccacccatgccttcaccgccaaggcccaggatagtgccggc
aatgccagcgccgcctcgaccgcgctcaacgtgcaggtggtggcggggccggcggcgccg
accgggctggccatttccaccgatagcggcagttccaacagcgatggcaagaccaccgac
acgacgctgatcctcaccggctcggctccggccaatgccaccgtgctggtctatcgcgat
ggcgtgtccatcggcaccaccaccgccgacggcaccggcgcctggacctatgattacacc
ggcaccaccctggccgaggggacctatgccttcaccgccgtgtcgcggttgttgggccag
gacagtgccgcgtccaccgccaagactgtggtggtcgataccaccgcgccggcggcgccc
tcggccttgaccatcagcagcgacactggcaactcggccaccgacggcatcaccagcgac
accaccttgaccatcggcggcagcgccgaggccaatgcctcggtcgaggtgttcaaggac
ggggtgtccatcggcaccgccaccgccgacggcaccggcgcctggagctttgattacacc
ggcaccaccctggccgagggcagctatgccttcaccgccatcgccaccgacgtagccggc
aatgtcggcaccgcctcgaccgccaaggcggtgacggtggataccaccgcgccggcggtg
ccggcggttaccgccatctccaccgacaccggcacctcgggcagtgacgccatcaccacc
gaccagaccctggtgatcagcggcacggcgacggccaatatcaccgtcgaagtgttcaag
gatggggcatccatcggtaccaccaccgccgacggtaccggcgcctggtctttcgaccac
accggcaccaccttggccctggccacctatgccttcaccgccaaggcccaggatagtgcc
ggcaatgccagcgccgcctcgaccgcgctcagcgtgcaggtggtggtggcgccggcggcg
ccgaccgggctggccatttccaccgatagcagcggcagttccaacagcgacggcatcacc
agcgacaccaccttgatcgtcagcggcacggccccgctcaatgccaccgtcaccatctac
aaggacggcgtttccatcggcaccgccaccgccgacggcaccaccggcgcctggagcttc
gaccacaccggcaccaccttggccgccggcgcccatgtctttaccgccaaggccaccttg
aacggccaggacagcgccgtctcctcggccttgaacgtgacggtggataccaccgcgcca
tcagcccccgcggtcaccgccatttccagcgacaccggttcgtcgcacagcgacggcatc
accatcgacaccggcttgaccatcagcggcacggccgaggccaatgccacggtcgaggtg
ttcaaggacggcgtctccatcggcaccaccaccgccgacggcgccggcgcctggagcttc
gaccacagcggcaccaccttggccctgggcaactatgccttcaccgccaaggccaaggat
gcggcgggcaatgaaagcgccgcatcgacgtccctgtcggtcagagtgaccatcgacgac
accgcgcccggtgcgcccagtctggcggccaccggcggcacctcgaccaccgttccggtc
accggtacggccgaggccgaagcgacggtgaagatttatgacggcgccaccttgctgggc
acggtcaccgtcgacgaggacggcaactggacctataccgccaccttggcggtgggcagc
cacaccttgaccgccaccgccaccgatgccgccggtaatgtctcggtggcctcggccccg
gccaccgtcaccatcaccgccgtggtggggagcccttccaatgatactggttcggggcgg
aacgagaacggggatgacactgcgcccaaaccgggaccgatcatcgataccaccccggtg
gcgcccttggtgactatcgtgcgcgataccgggacgggaaccggtggttttggtgccgat
gccggtggcaaccttggtggggggcttgggggtggccttggcggcgcgacgacggggacc
gggaccggcgcgataacgtccgttgtcggcgacggtttgacccgtccgggggggaattcc
ttccaggtggcgcttgcggggcgctcggctgggggcggcgatgccttggtgatcaacgcg
cccatgcgtgacgcgatcgtggccgagggcacccgcatttccgtgaccattcccgccgat
accttcgcccataccaaggccgacgcggtggtgtcgctgacggcgacccgggccaatggc
gcggcgctgccgggctggatggcgttcaatccctccaccggcactttcgaggggacaccg
ccacccggtttccgtggcgaggtggtggtgcgcgtcatcgcccgcgacaatgacggtcgc
caagtggttcagaccttcaagatcgtcgtcggccagggccagggtaatgccgcgccggca
gagggcggccaaggtggtggcggtcgtgacgggggccagggtgaaggccagggccagggc
ggtccgcaagctcccggtcgcaccggcgacgcgtccccgtttggccgtcccggcctgacg
gcgcaattgcgggcgctgggccaggatggccaggcgaccaagcaggcggttttgttcaac
gcattgaagaccagcggcaaggccgcgtag
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