Magnetospirillum gryphiswaldense MSR-1: MSR1_30350
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Entry
MSR1_30350 CDS
T05662
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry03030
DNA replication
mgry03430
Mismatch repair
mgry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSR1_30350 (dnaQ)
03430 Mismatch repair
MSR1_30350 (dnaQ)
03440 Homologous recombination
MSR1_30350 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgry03032
]
MSR1_30350 (dnaQ)
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_30350 (dnaQ)
Enzymes [BR:
mgry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSR1_30350 (dnaQ)
DNA replication proteins [BR:
mgry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSR1_30350 (dnaQ)
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSR1_30350 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Amidohydro_3
Motif
Other DBs
NCBI-ProteinID:
AVM75502
UniProt:
V6F7R0
LinkDB
All DBs
Position
complement(3210236..3210922)
Genome browser
AA seq
228 aa
AA seq
DB search
MREIVLDTETTGFDPLTGHRIVEIGCVELFNHLPTGKVYHQYVNPERDMPEEAFKVHGLS
EQFLSDKPVFAEIVADFMDFIGDAILVIHNAEFDMRFINAELSRLGFQPLPMSRSIDTVA
MARKKFPGAQANLDALCRRFEIDNTHRSFHGALLDSELLAEVYLQLIGGRQPGLELGLLG
GNGKGGGGPVLERVKREPRPHAALPEELEAHAAFVGKLKKALWLREPE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtacttgatacggaaaccaccggcttcgatccgctgaccggccatcgc
atcgtcgaaatcggctgtgtcgagctgttcaaccacttgcccaccggcaaggtctatcac
caatacgtcaaccccgagcgcgacatgccggaagaggcgtttaaggtgcacggcctgtcc
gagcaattcctgtcggataagccggtcttcgccgagatcgtcgccgatttcatggacttc
atcggcgacgccatcctggtgattcataacgctgaattcgatatgcgtttcatcaatgcc
gaactgtcgcggctgggtttccagcccctacccatgagccgctccatcgataccgtggcc
atggcgcgcaagaagtttcccggcgcccaggccaatctcgacgccctgtgccgtcgcttc
gaaatcgacaacacccaccgttccttccacggcgcgctgttggattcggaattgctggcc
gaggtctatctgcaactgatcggcggacgccagcccggtttggaactgggacttctgggc
ggcaacggcaagggcggcggcggtccggtgctggaacgggtcaagcgcgaaccgcgtccg
cacgccgccctgccggaggaactggaggcgcatgcggcctttgtcggcaaactgaagaaa
gccctctggctgcgcgagccggaataa
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