Magnetospirillum gryphiswaldense MSR-1: MSR1_36710
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Entry
MSR1_36710 CDS
T05662
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry03030
DNA replication
mgry03430
Mismatch repair
mgry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSR1_36710 (dnaX_2)
03430 Mismatch repair
MSR1_36710 (dnaX_2)
03440 Homologous recombination
MSR1_36710 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgry03032
]
MSR1_36710 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_36710 (dnaX_2)
Enzymes [BR:
mgry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSR1_36710 (dnaX_2)
DNA replication proteins [BR:
mgry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSR1_36710 (dnaX_2)
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSR1_36710 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_16
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_14
AAA_19
AAA_18
DUF815
AAA_24
ResIII
AAA_assoc_2
AAA_2
Mg_chelatase
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
AVM76130
LinkDB
All DBs
Position
3855992..3857752
Genome browser
AA seq
586 aa
AA seq
DB search
MTDTVQPTPYRVLARKYRPTDFATLIGQDAMVRTLTNAIASGRLAHAFVLTGVRGVGKTT
TARIIARALNCIGPDGQGGPTIDPCGQCEHCRAIAEDRHVDILEMDAASRTGVNDIREII
ESVRYRPTSARFKVYIIDEVHMLSTAAFNALLKTLEEPPEHVKFIFATTEIRKIPVTVLS
RCQRFDLRRVEMEVLAKHFSGIADKEGAEIEPGALRLIARAADGSVRDGLSLLDQAISHG
AGLVSEAQVRDMLGLADRARVFDLFELVMKGQMAPALDLLAEQYALGADPAVVVQDMLEL
AHWLTRLKITPDAADSSAASETEKVKGTQMAGDLSMAQLTRTWQMLLKGLAEVRAAPNPL
QAAEMSLVRLAYVADLPSPADLIQQLRDNPPSPRGPGGGGAPAPGGGGTVALSTRMVSPG
SMGGPSAALKMEPALAAQPIHLPAMPASFAEVVALFSEKREGVLAVHLRNQVNPVKFEAG
RIEFRPHKSAPQDLAPRVSRLLSEWTGRRWTVTVNLTDPADPTLSEQEALAEHKRREDAA
NHPLVRAVLDAFPGAAIEIVRDLVEAEPEESDLAFDADLTPGEEEL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgttcagcccacgccttaccgcgtccttgcccgcaagtaccgtccgacc
gatttcgccaccctgatcggtcaggacgccatggtgcggacgctgaccaacgccatcgcc
tcgggtcggttggcccatgccttcgtgctgaccggcgtgcgcggtgtgggcaagacgacg
acggcgcgcatcatcgcccgggcgctcaactgtatcggccccgatggtcagggcggtccg
accatcgacccctgcggccagtgcgaacattgccgggccatcgccgaggatcgccacgtc
gatatcctggagatggacgccgccagccgcaccggcgtgaacgatatccgcgagatcatc
gaaagcgtgcgctaccggccgacctcggcccggttcaaggtctatatcatcgacgaagtg
cacatgctgtccaccgccgccttcaatgccctgttgaagacgctggaagaaccgccggaa
catgtgaagttcatcttcgccaccaccgaaatccgcaagattccggtcaccgtgctgtcg
cgctgccagcgtttcgacctgcgtcgggtggaaatggaggtgttggccaagcatttctct
ggtatcgccgacaaggaaggggccgagatcgagccgggcgccctgcgcctgatcgcgcgc
gccgccgacggctcggtgcgcgacgggctgtcgctgttggatcaggccatttctcacggc
gccgggctggtgtcggaagcccaggtgcgcgacatgctggggctggccgaccgcgcccgc
gtcttcgatctgttcgaattggtgatgaaggggcagatggccccggcactcgatctgctg
gcggaacaatatgccctgggcgccgatccggcggtggtggtgcaggacatgctggaactg
gcccattggctgacccggctgaagatcacccccgatgccgccgattcctccgccgcctcg
gaaaccgaaaaggtcaagggcacgcagatggccggcgatctgtccatggcccaactgacc
cgcacttggcagatgctgttgaaggggctggccgaggtgcgcgcggcccccaatccgttg
caggcggcggaaatgtcgctggtgcggctggcctatgtcgccgatctgcccagtcccgcc
gatctgatccagcaattgcgagacaacccgccgtcaccgcgtggtcccggcggcggcggc
gctcccgctcccggtggtggcggaaccgttgccttatcgacacgaatggtgtcccccggt
tccatgggcgggccgagcgcggccttgaagatggagccggccttggccgcccaacccatc
cacctgccggccatgccggccagctttgccgaagtggtggcgctgttctcggaaaagcgc
gaaggcgtgctggccgtgcatttgcgcaatcaggtcaatccggtcaagttcgaggcgggg
cgcatcgagttccgtccccataaaagcgcgccgcaggatctggcgccgcgcgtctcgcgc
ctgctgtcggaatggaccgggcggcgctggaccgtcaccgtcaatctgaccgaccccgcc
gatccgacgctgtcggaacaagaggccttggccgaacacaagcggcgcgaggacgcggcc
aaccatccgctggtccgcgccgttctcgatgcctttcccggtgccgccatcgaaatcgtc
cgcgatctggtggaagcggaaccggaagaaagcgatctggcctttgatgccgatttgacc
ccaggagaagaggaattatga
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