Magnetospirillum gryphiswaldense MSR-1: MSR1_37960
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Entry
MSR1_37960 CDS
T05662
Symbol
gatB
Name
(GenBank) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00970
Aminoacyl-tRNA biosynthesis
mgry01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MSR1_37960 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
mgry03029
]
MSR1_37960 (gatB)
Enzymes [BR:
mgry01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
MSR1_37960 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
MSR1_37960 (gatB)
Mitochondrial biogenesis [BR:
mgry03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MSR1_37960 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AVM76253
LinkDB
All DBs
Position
complement(3968983..3970434)
Genome browser
AA seq
483 aa
AA seq
DB search
MIIQGDTGDWEIVIGLEVHAQVISKSKLFSGAATDFGAEPNDQVSFVDAGFPGMLPVINE
KCVEQAVRTGLGLKAKINLTSVFARKNYFYADLPQGYQISQYDLPIVGEGTLLIDLADGT
SRAIGIERLHLEQDAGKSIHDMHPSKSYIDLNRSGVALMEIVSKPDMRSPEEAGAYLTKL
RTILRYLETCDGNMQEGSMRCDANVSVRPVGSTELRTRCEIKNVNSIRFVQQAIEYEARR
HIDVYENGGEIKQETRLFDSVKGETRSMRSKEHAHDYRYFPDPDLLPLVVAQDFVDGIQA
TLPELPDDKKARFMADFGLNAYDAGVLVAERASADFFEAVAAGRDAKMAANWIMGDFFAA
MNSGDYSWEKPPVSAQNLGKMIDLIKDGTISTRLAKDVFIFMLESGKDPAIIVEEKGLKQ
VTDTGAIEKAIAEVMAANPDKVAEVKAGKDKLIGWFVGQVMKATQGKANPGMLNELIVKK
FQE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgattattcaaggcgacaccggcgattgggaaatcgtcatcggtctggaagtgcacgcc
caggtcatttccaagtccaagctgttttccggcgccgccaccgattttggcgccgagccc
aacgatcaggtcagcttcgtcgatgccggcttccccggcatgctgccggtgatcaatgaa
aaatgcgtggaacaggcggtgcgcaccggtctggggctgaaggccaagatcaacctgacc
tcggtcttcgcccgcaagaactatttctacgccgacctgccgcagggctatcagatcagc
cagtacgacctgcccatcgtcggcgaaggcacgttgctcatcgatctggccgacggcacg
tcccgcgccatcggcatcgagcgcctgcatctggagcaagacgcaggcaagtccatccac
gacatgcacccgtccaagtcgtatatcgacttgaaccggtcgggcgtggcgttgatggaa
atcgtctccaagcccgatatgcgttccccggaagaggccggcgcctatctgaccaagctg
cgcaccatcctgcgttacctggaaacctgcgacggcaacatgcaggaaggcagcatgcgc
tgcgacgccaacgtctcggtccgcccggtgggcagcaccgaattgcgtacccgctgcgag
atcaagaacgtcaattccatccgcttcgtccagcaggccatcgaatacgaggcccggcgc
cacatcgacgtctacgagaacggtggcgagatcaagcaggaaacccgcctgttcgattcg
gtcaagggcgagacccggtccatgcgcagcaaggaacatgcgcatgattaccgttatttc
cccgatcccgatttgctgcccttggtggtggcccaagatttcgtcgatggcatccaggcc
accttgcccgaactgcccgacgacaagaaggcccgtttcatggccgatttcggcctgaac
gcctatgatgccggggtgttggtggccgaacgcgccagcgccgatttctttgaagccgtc
gccgccgggcgtgatgccaagatggccgccaactggatcatgggcgatttcttcgccgcc
atgaattccggcgattattcgtgggaaaagccgccggtttcggcccagaacttgggcaag
atgatcgacctgatcaaggacggcaccatttccacccgtctggccaaggacgtgttcatc
ttcatgctcgaatcgggcaaagaccccgcgatcatcgtcgaggaaaagggcctgaagcag
gtcaccgacaccggggccatcgaaaaagccatcgccgaggtgatggccgccaaccccgac
aaggtggccgaggtcaaggccggcaaggacaagctgatcggctggttcgtcggccaggtg
atgaaggcgacccagggcaaggccaatcccggcatgctcaatgagttgatcgtcaagaag
ttccaggaatag
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