Magnetospirillum gryphiswaldense MSR-1: MSR1_38190
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Entry
MSR1_38190 CDS
T05662
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00470
D-Amino acid metabolism
mgry00550
Peptidoglycan biosynthesis
mgry01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSR1_38190 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MSR1_38190 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgry01011
]
MSR1_38190 (murD)
Enzymes [BR:
mgry01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MSR1_38190 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mgry01011
]
Precursor biosynthesis
Amino acid ligase
MSR1_38190 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
NAD_binding_2
NAD_binding_7
TrkA_N
KARI_N
F420_oxidored
AlaDh_PNT_C
Shikimate_DH
Peptidase_M17_N
Motif
Other DBs
NCBI-ProteinID:
AVM76276
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Position
complement(3994018..3995364)
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AA seq
448 aa
AA seq
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MIRVPFLTDKRVVVLGLGKSGSATVRALVESGARVTGWDDNQAARDAAQAAGIPLADPLA
LDLSEVDMIVWSPGIPHTFPQPHPLAEAARAADIPLVCDIELLAIAKPDAKFVLITGTNG
KSTTTTLVAHILTSAGIANAAGGNLGTAALDLPDLDADGIYVLELSSYQLELTRSLRARA
GVLLNITPDHLGRHGGMDGYIAAKRRLYDFIAADGVSVIGLDDAPTRGIADWLLGAGHRH
TAISVKQVLDHGISAPDGILRQNGVEIFDLTAIATLPGRHNWQNACAAFALVSAVGVPST
AIAAGIASYPGLAHRQQLVGNRNGVRFVNDSKATNAEAAEVALVCYDAIHWIIGGQAKEG
GIASLERHFHRIKHAYLIGDAAPAFAETLAGKVAFTQCGSLDRAVTAAAAQAQPGEVVLL
SPACASWDQFKSFEHRGEIFRDLVRGLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgtccccttcctgaccgataagcgtgtggtggtgctgggcctgggcaagtcc
ggcagcgccaccgtgcgcgccttggtcgaaagcggcgcgcgggtcaccggctgggacgac
aatcaagccgcccgcgatgcggcccaggccgccggcatccccctggccgatccgctggcc
cttgatctgtcagaggtcgacatgatcgtgtggagcccgggcatcccccacaccttcccg
caaccgcatcccctggccgaggcggcgcgggccgccgacattccgctggtctgcgatatt
gaattgctggcgatcgccaagcccgacgccaaattcgtgctgatcaccggcaccaacggc
aagtcgaccaccaccaccctggtcgcccatatcctcaccagtgccggcatcgccaatgcc
gccggcggcaatctgggtaccgccgcccttgacctgcccgatctggatgccgacggcatc
tatgtactggaactgtcgtcctatcagttggaactgacccgcagcttgcgggcgcgggcc
ggcgtgctgttgaacatcacccccgaccatctgggacgccatggcggcatggatggctat
atcgccgccaaacgccggctgtacgacttcatcgctgccgacggcgtctcggtcatcggt
ctcgacgacgcgccgacgcgtggcatcgccgactggctgttgggcgccggtcaccggcac
accgccatttcggtcaagcaggtgctggaccacggcatcagcgcccccgacggcatcttg
cgccagaacggcgtcgaaatcttcgacctgacggccatcgccaccctgcccggtcgccac
aactggcaaaacgcctgcgccgccttcgccctggtcagcgccgtgggcgtgccgtccacc
gccatcgccgccggcatcgccagctatcccggtctggcccatcgccagcaattggtcggc
aaccgaaatggcgtgcgcttcgtcaacgattccaaggccaccaacgccgaagcggcggaa
gtggccctggtctgctatgacgcgattcactggatcatcggcggccaggccaaggaaggc
ggcatcgccagcctggaacgtcacttccaccgcatcaaacacgcttatctgatcggcgat
gccgccccggccttcgccgaaacgctggccggcaaggtcgccttcacccaatgcggcagc
ttggaccgcgccgtgaccgcagccgccgcccaggcgcagccgggcgaggtggtgctgctg
tcgccggcctgcgcctcgtgggaccagttcaagagcttcgaacatcgcggcgaaatcttc
cgcgacctggtcagggggctgtcatga
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