Magnetospirillum gryphiswaldense MSR-1: MSR1_39400
Help
Entry
MSR1_39400 CDS
T05662
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00061
Fatty acid biosynthesis
mgry00071
Fatty acid degradation
mgry01100
Metabolic pathways
mgry01212
Fatty acid metabolism
mgry02024
Quorum sensing
mgry04146
Peroxisome
Module
mgry_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MSR1_39400 (lcfB_2)
00071 Fatty acid degradation
MSR1_39400 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MSR1_39400 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSR1_39400 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mgry01004
]
MSR1_39400 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgry04147
]
MSR1_39400 (lcfB_2)
Enzymes [BR:
mgry01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MSR1_39400 (lcfB_2)
Lipid biosynthesis proteins [BR:
mgry01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MSR1_39400 (lcfB_2)
Exosome [BR:
mgry04147
]
Exosomal proteins
Exosomal proteins of breast milk
MSR1_39400 (lcfB_2)
Exosomal proteins of breast cancer cells
MSR1_39400 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AVM76393
LinkDB
All DBs
Position
4112031..4113578
Genome browser
AA seq
515 aa
AA seq
DB search
MPTIIQRFLAHVRATPDKIALVFSDQPVSYADLAEEVRRLAAGLTGLGVGRGSRVLVLLK
NCRAFAALMLAAAERGAVIVPVSAGLRGEALVTAFTATECQFVVGHGPLLAPFAGLVEAG
KCVSVDGAAPGCCLYDELLVQAADDYALGQGDDGDDLPYILTMTSGSTGAPKPIIFSQAT
KIARAQSAVDCYGLTANDVVLAATPLYHSLAQRLVLMPLMFGMSAVVLEPFTPAGWMAAV
ERWRVSFTIPVSSQLSALLPHFLAEPARLASLRVLVSSSAQIAEDLKRRLAALLACQFHE
IYGASEVGVISNLSPDHPAGKMASVGLPLAGIDLRILGDDGAVLPVGEIGEIACRTPTAF
LGYYNRPDATVAAWCDGYFRTGDLGWVDADGFLYFSGRKKDLVISGGINIYPIDIERVLM
GTGLLADCAAIGLPDSYLGEAVLAVVVPKEAAGFDLRPLRRACVEQLADYQQPLDFAVVT
ALPKNALGKTVKPELQERFKGKDLSARLRGLLGLS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccatcattcagcgtttcctcgcccatgtccgggcgacgcccgacaagatcgcc
ctggtgttttccgaccagccggtcagttatgccgatttggccgaggaggtgcgccggctc
gccgccggtctgaccggcctgggcgtcggtcgcggcagtcgcgtgctggtgctgctgaag
aattgccgggccttcgccgccctgatgctggccgccgccgagcgcggcgcggtgatcgtt
ccggtcagtgccggtctacgcggcgaggcgctggtcaccgccttcactgccaccgaatgt
caattcgtcgtcggccacgggccgcttctggcgccgttcgccgggctggtcgaggcgggc
aagtgcgtcagcgtcgacggtgccgcgcccggatgctgtctttatgatgaattgttggtc
caggccgccgatgattacgccttggggcaaggcgacgacggggacgacctgccctatatc
ctgaccatgacctcgggctcgaccggggcgcccaagccgatcatcttctcgcaagccacc
aagatcgcccgcgcccaaagcgccgtcgattgctatggcctgacggccaacgacgtggtg
ctggccgccaccccgctgtaccattccctggcccaacgtctggtgctgatgccgttgatg
ttcggcatgagcgcggtggtgctggagcccttcaccccggcgggctggatggcggcggtg
gaacgctggcgggtcagcttcaccatcccggtgtcgtcgcaactgagcgccttgttgccg
catttcctggccgagccggcgcgtctggccagcctgcgcgtgctggtgtcgtcgtcggcg
cagatcgccgaagacctgaagcgccgcctcgccgccttgctggcctgccagttccacgaa
atctacggggcgtcggaagtcggcgtgatctccaatctgtcgcctgaccatcccgctggc
aagatggccagcgtcggcctgccgctggccggtatcgacctgcgcatcctgggcgatgac
ggcgcggtgctgcctgtgggggagatcggcgagatcgcttgccgcacccccaccgccttt
ctcggctattacaaccgtcccgacgccaccgttgccgcctggtgcgacggctatttccgc
accggcgacctgggctgggtcgatgccgacgggtttttgtacttttctggtcgcaagaag
gacttggtgatcagcggcggcatcaacatatatcccatcgacatcgagcgggtgctgatg
ggcaccggtttgctggccgattgcgccgctatcggcttgcccgacagctatctgggcgag
gcggtgctggcggtggtggtgccgaaggaggcagctggcttcgatctcaggccgctgcgc
cgggcctgtgtggagcaactggccgactaccagcagccgctggatttcgcggtggtgacg
gccttgcccaagaacgcgttgggcaagacggtcaagcccgagttgcaggagcgcttcaag
ggcaaggatctgtcggcacggctgcgcggcttgctgggattgagttaa
DBGET
integrated database retrieval system
