KEGG   Mycoplasmoides genitalium M2288: CM5_00585
Entry
CM5_00585         CDS       T02208                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mgu  Mycoplasmoides genitalium M2288
Pathway
mgu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mgu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CM5_00585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgu03019]
    CM5_00585
   03016 Transfer RNA biogenesis [BR:mgu03016]
    CM5_00585
Enzymes [BR:mgu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CM5_00585
Messenger RNA biogenesis [BR:mgu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CM5_00585
Transfer RNA biogenesis [BR:mgu03016]
 Prokaryotic type
  tRNA degradation factors
   CM5_00585
SSDB
Motif
Pfam: RNB S1 CSD2 Importin_rep MOLO1 DUF5053
Other DBs
NCBI-ProteinID: AFQ04411
LinkDB
Position
131378..133555
AA seq 725 aa
MKVLTELQKQIFTIVKKENGKPIPPGIVVRMMENSPNFPGKHLIYRAIDDLLDWAILRKA
GGVTNQLLVNYEPAEPLLDKKLQGILTLGNKNSGFIRSLDDDKTVYYVHYSNLTGALDGD
LVEFCKLDKPQFGDKFDAAVITILKRARILYAGNFLVDQNEFALEYKIVADNPRFYLTTI
VNPDSIPNNLASNTKIAFQIDEYDPDNNLCKVSVQQVLGNNDDPLINIKAIMLDNSIVFE
TNDVVEQHANKLSFDTEEQHKAYRQDLTDLAFVTVDPTTSKDLDDAIYVKTIPTGFVLYV
AIADVAHYVNRNSEIDIEAKHKTSSIYLPGHYVVPMLPEQLSNQLCSLNPAQKRYVVVCE
ISFDNQGRIKTNKLYPATIISKNRFSYDQVNQWLNNKSELNCDETVINSLKAAFTLSDLI
QKQRQKRGTIDLSHKETEIVVDEHYFPIKINFLVHDKAETMIENLMVVANETVAWVLTNN
KIALPYRVHPRPSKKKLQSLIETVGELNITKPQFNLDTVTSSQIASWLNENKDNPSYEIF
VILLLRTLGKAFYSVNPLMHFSIGSNHYTHFTSPIRRYIDLTIHRLLWMHLFTPDQFTDN
ERDQLKQELEKIADTVNDTEIKIINCERNANDYLTTLLLSKQIGKTFSGFISAITSFGIF
MRMDENNFDGLIKITTIPDDFFIFEKEKMVLKGRKTNKVYKIGDRLEAKLSEIDFIQKRA
ILTLI
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgaaggttttaactgaacttcaaaagcagatatttaccattgtcaaaaaggaaaatggt
aaacctattccccctggaatagtggtaagaatgatggaaaatagtcctaattttccaggt
aaacacctcatctatcgggccattgatgatctgcttgattgagccatcttaaggaaagct
ggtggggttacaaatcagctattagttaactatgaacctgctgagcctttacttgataaa
aaactacaagggattttaaccttaggaaataagaatagtggttttatccgctctttggat
gatgataaaactgtgtattatgtccattactctaatttaactggagctttagatggggat
cttgtggagttttgtaaattagataagccacaatttggtgataagtttgatgctgcagtt
attactattctaaaaagagcaagaatcttgtatgcaggtaattttttagtagatcaaaat
gagtttgccttggaatacaaaattgttgctgataaccctagattttatttaactacgatt
gtaaatcctgattctatcccaaataacttagcatctaacaccaagatagcttttcaaatt
gatgagtatgatcctgataacaacttatgtaaggtttctgtacaacaagttttgggtaac
aatgatgatccgctaattaatataaaagcaatcatgttggacaattccattgtctttgaa
actaacgatgtagttgaacagcatgctaacaagttaagttttgatactgaagaacaacat
aaagcttaccgtcaggatttaactgatttagcttttgtgactgttgatcctacaacatca
aaagaccttgatgatgctatttatgtcaaaacaataccaacaggttttgtgctttatgta
gctattgctgatgttgcacactatgttaatagaaatagtgaaatagacattgaagcaaaa
cacaaaacaagctcaatctatctacctggtcattatgttgtgcccatgctacctgagcaa
ttgtcaaatcagctctgttctttaaatccagcacaaaaacgttatgttgttgtttgtgag
attagttttgataatcagggaaggattaaaacaaacaagctttacccagcaacaattatc
tccaaaaatcgctttagctatgatcaggttaaccagtggttaaataataaatcagaatta
aactgtgatgaaacagttatcaacagcttaaaagcagcatttacactaagtgatctaatt
caaaagcaacgtcaaaaacgcggtacaattgatctttcacacaaagaaactgagatagtt
gttgatgaacattattttcccattaagataaattttttggttcacgataaagctgaaacc
atgattgaaaatctcatggtagtggccaatgagacagttgcttgggtgttaactaacaac
aaaattgctttaccatacagagttcacccaagaccaagcaaaaagaagttacaaagtttg
attgaaacagttggtgagttgaacataactaaaccccaatttaacttagatactgtcact
tcaagccaaatagctagctgattaaatgaaaacaaagataatcctagttatgagatcttt
gtaatcctcttattaagaacactaggcaaagctttttatagtgttaatcccctgatgcac
ttcagcattggttctaaccactatacccactttacttcaccgattagaaggtatatagat
ctaaccattcacaggttgttgtgaatgcatctttttactcccgatcaattcactgataat
gaaagagatcaactcaaacaagagttggaaaaaattgctgatacagttaatgatacagag
attaaaattatcaattgtgaaagaaatgccaatgattatctaacaacgctgttattatca
aaacaaattggcaaaaccttcagcggatttatttcagcaattactagctttggaattttt
atgagaatggatgaaaataactttgatgggttaatcaaaattacaactatccctgatgat
ttctttatttttgaaaaggaaaaaatggtattgaaaggaagaaaaactaataaggtttat
aaaattggcgatcgtttggaagctaaactaagtgagattgatttcatccaaaaacgtgct
attttaacactcatataa

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