Mycoplasmoides genitalium M6320: CM1_02080
Help
Entry
CM1_02080 CDS
T02211
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mgx
Mycoplasmoides genitalium M6320
Pathway
mgx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CM1_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgx03021
]
CM1_02080
03400 DNA repair and recombination proteins [BR:
mgx03400
]
CM1_02080
Enzymes [BR:
mgx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CM1_02080
Transcription machinery [BR:
mgx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CM1_02080
DNA repair and recombination proteins [BR:
mgx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CM1_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
MCM_C
Motif
Other DBs
NCBI-ProteinID:
AFQ04172
UniProt:
A0ABC7ZIY6
LinkDB
All DBs
Position
complement(430318..434196)
Genome browser
AA seq
1292 aa
AA seq
DB search
MTTTRRNKRNNKLYKNIKAIKLSIASNDTILNWSEGEVTKAETINYKSLKPEPGGLFDEA
IFGPVKDYECACGKFKKIKYRGVRCDRCGVWVTESIVRRERMGHIALVSPVAHIWMSKEL
PSPSKISLVLNISYKEVEQVLYFVNYIVLDTGKIKDDKIMPFKFKEVLDLTGKGSLSTRQ
KMRRVIGYIFRNLIKSKSSEDYRKGKIFYESLKNSSLPFSLNDAFNYIKKYTGFRVGIGA
EAILELLNKIDLNLEFSRLNDALRKAKKDSVEDAKVKKILRQLETISWFRNSKLHPKNMI
LHTVPVIPPDIRPIIQLDGAKFTTSDINNFYRRVIIRNDRLRRILEDGTVPSIVVNNEKR
LLQESVDALFDNSSRHKPSLSKDKRSLKSLTDRLKGKQGLFRHNLLGKRVDYSGRSVIVV
GPELKMYEVGIPALMILKLFKPFIIHGLINKFDENGNEIRPIAASIRQAEDMIKNQDDLI
WGIVYDVIKDRPVLLNRAPTLHRLGIQAFEPRIVDGKAIRLHPLVTTAFNADFDGDQMAV
HVPLSDNAVNEARAVLLASKHILGLKDGRPIVTPTQDMVLGNYYLTTERKGQLGEGIIFS
TVYEARAAYESQKVHLHAIVGISTKAFPNKKFACQGTLITTVGKIIFNDVLGNNVPYIND
GEFDENACPEKFIVKQGEDVRQAILKHQIIPAFSKKVISKLIDLLYLLLEFKDLPKTLDN
IKALGFKYSTFSSTTVSVFDIPKYTNKQNYFDSADQQVLKYKQFYNKGLLTDDERYKRVV
KLWNNVKEKVSDEIQSLIKQEQYRDNSIVVMADSGARGNISNFTQLFGMRGLMSKSFNYE
RNNQSKIIKDTIEVPIKHSFFEGLTINEYFNSSYGARKGMTDTAMKTAKSGYMTRKLVDA
THELIINHDDCGTRKGIVVEAIVETKTKSLIESLFDRIVNRYSITPIVDPETQKTIVETN
SLITTQLAKQICATSIKEVLVRSVIYCERENGICQYCFGIDLSTGKLVELGTAVGVIAAQ
SIGEPGTQLTMRTFHTGGVSTENNLAQGFERLKQIFEVVTPKDFEKAVISEVKGTVKSIT
TVQNAQEVVIKSNVDERIYTIPFSAQIRVHVGDQVSPGSKITEGSVDIKQLLRIAGIQRV
RQYMIVEIQKVYRIQGIDIADKYVEIIIRQLTNLLQVTDAGNSNLFVGQLVHSHYLNELN
KSLLLAGKMPVIAINQVFGIDEAASKSNSFLSAASFQDTKKILTDAAVKNQVDYLLGLKE
NVIIGGKIPAGTGFLTDEELTFLGSKTVAEEY
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacaagacgtaataaaagaaataacaagctttataaaaacattaaagcaatt
aaactttccatcgcttccaatgacaccattttgaactgatctgaaggggaagttacaaaa
gctgaaaccattaactataaatcattaaaaccagaacctggaggcttgtttgatgaagca
atctttggacctgttaaggactatgaatgtgcttgtggcaagttcaaaaagattaaatat
cgtggtgtgaggtgtgatcgctgtggggtgtgagttactgaatctattgtacgtagagaa
aggatgggacatattgcacttgtgagtcctgtagctcacatttggatgtcaaaagaatta
ccatctccttccaaaatatcattagttttaaacatctcttacaaagaggttgaacaggtt
ttgtactttgttaactacatagtacttgatacaggtaagatcaaagatgataaaatcatg
ccttttaagttcaaagaagttttggacttaactggtaagggttcactttcaacacgacaa
aaaatgcgtcgtgtgataggttatatcttcagaaatctcattaaaagtaagagtagtgaa
gattaccgtaagggaaaaatcttttatgaaagtttgaaaaacagctctctccccttttct
ttaaatgatgcttttaattacattaagaagtacactggttttagggttggaataggggct
gaagcaattttggaattgcttaataaaatcgatcttaacttggaatttagcaggttaaat
gatgctttaagaaaagccaagaaagatagtgttgaagatgctaaagttaagaagatctta
agacaactggaaactattagttggtttagaaattctaagcttcatcctaaaaacatgatc
ttacatactgttccagttatcccccctgatatcagacctattatccaacttgatggtgct
aagtttaccaccagtgacatcaacaatttttaccgcagggtaatcattagaaatgaccga
ttaagaaggattttggaagatggtactgtaccttctattgttgttaacaatgaaaaaaga
cttttacaagagtctgttgatgctttatttgataactcttcacgtcataaaccatcactt
tccaaagacaaacggtcattgaaatctttaacagatcgtttaaaaggaaaacaaggttta
tttagacacaacttacttggtaaaagagttgattattcaggtagaagtgtaattgtggtt
ggccctgaattgaagatgtatgaagttgggatcccagcactaatgatcttaaagctgttt
aaaccctttattatccatggattgatcaataagtttgatgaaaatggtaatgagattaga
ccaattgccgcttccatcagacaagctgaagatatgattaaaaaccaggatgatcttatc
tggggaatagtttatgatgttatcaaagatcgtcctgttttactaaatcgtgctccaacc
ctacataggttagggatccaagcatttgaaccaagaattgttgatggtaaagcaattaga
ttacacccattagtaactactgcatttaatgctgattttgatggtgatcagatggcagtt
catgttcctttaagtgataatgcagttaatgaagcaagagctgttctgcttgcatcaaaa
catatcttaggtttgaaagatggaagacctattgtaactcctactcaggacatggtttta
ggtaactattatctaaccacagagagaaaaggacagttgggagaggggattatcttcagc
acagtttatgaagcacgtgctgcttatgaaagtcaaaaggttcatttacatgctattgta
gggataagtactaaagcatttcccaacaagaagtttgcatgccaaggaactttaataaca
acagttggtaagattatctttaatgatgttttaggcaataatgttccttatattaatgac
ggggaatttgatgaaaatgcatgtcctgaaaagttcattgtgaaacagggagaagatgta
agacaagcaattttaaagcatcaaattatccctgcattttccaaaaaggttatttccaag
ttaattgatctactctatcttttattggaatttaaagatcttcctaaaacacttgataat
atcaaagcacttggctttaagtactctactttttcttcaactactgtttcagtatttgat
atccctaagtacactaataaacaaaattactttgatagtgctgatcaacaggtgctgaaa
tacaaacagttttataacaagggtttgttaaccgatgatgaacgttataaacgcgttgtg
aagttatgaaacaatgtgaaagaaaaagtatctgatgagatccaaagcttaattaaacaa
gaacagtaccgtgataattccattgtggtaatggctgattcaggcgctagaggtaacatt
tctaactttacccagttatttgggatgcgcggcttaatgtctaaaagctttaactatgaa
agaaataaccaatctaagatcattaaagatacgatagaagttcctattaaacactccttt
tttgaaggtttgaccattaatgaatacttcaactcttcttatggagcgagaaaagggatg
acagatactgcaatgaaaacagcaaagtctggttatatgacaagaaagctagtagatgct
actcatgaattaattattaaccatgatgattgtggaacaagaaaaggaattgttgttgaa
gcaattgttgaaaccaaaaccaaatccttgattgaatcattatttgacaggattgttaat
cgctactcaattactcctatagttgatcctgaaacacaaaaaactattgtagaaactaac
agtcttattacaacgcaattagctaaacagatttgtgcaacatctattaaggaagtttta
gttagatctgttatctattgtgaaagggaaaatggtatctgtcaatactgctttggcatt
gacttgtcaactggtaagttggtggaattgggaactgctgttggggtgattgctgctcaa
tcaattggtgaacctgggacccaattgacaatgcgtactttccatactgggggagtttca
actgaaaacaacttagcacaaggctttgaacgtttaaaacagatctttgaagtagttact
cctaaagattttgaaaaagcagttatctctgaagtgaaaggaacagttaaatcaattact
actgttcaaaacgctcaggaagtagtgattaaatcaaacgttgatgagaggatttatact
atccctttcagtgctcaaatacgtgttcatgttggtgatcaagtttcaccaggttctaag
attacagaaggttctgttgatattaaacaacttttgcgaattgcaggtatccaaagggta
agacaatacatgattgtagagatccaaaaagtgtataggattcaagggatagatattgct
gataagtatgtagaaattattatcagacaactaactaatttgttgcaagtaacagatgca
ggtaacagcaatttatttgttggtcagttagtgcatagccattatctcaatgaactaaat
aagagcttacttttagctggaaagatgcctgttattgcaattaatcaggtgtttggaatt
gatgaagcggcaagtaaatctaactcctttttaagtgctgcatccttccaagataccaaa
aaaatcctaactgatgctgctgttaagaaccaagtagactatcttttaggtttaaaagag
aatgttattattggtggaaaaattccagcaggaacaggatttttaactgatgaagagtta
actttcttaggtagcaaaacagttgctgaagagtattaa
DBGET
integrated database retrieval system
