Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__0290
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Entry
MGMSRv2__0290 CDS
T02960
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgy03032
]
MGMSRv2__0290 (topA)
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__0290 (topA)
Enzymes [BR:
mgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MGMSRv2__0290 (topA)
DNA replication proteins [BR:
mgy03032
]
Prokaryotic type
DNA Topoisomerases
MGMSRv2__0290 (topA)
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MGMSRv2__0290 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
CDK97505
UniProt:
V6EW43
LinkDB
All DBs
Position
329087..331747
Genome browser
AA seq
886 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGSDFQVLASYGHIRDLPAKDGSVRPDEGFAMDWEADAKSER
QIKEIANAVKKADKLFLATDPDREGEAISWHVQAVLEAKGVLKGKEVKRVVFNEITKSAV
TEAMRNPREVHQDLVDAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICER
ETEIESFKSQEYWTLAADFLTAKGAMITAGLTHLNGGKLDKFALGNETSALAAKAAIEAA
SFTVASVERKKAKRNPYAPFTTSTLQQEASRKLHYGAQKTMQLAQRLYEGVDIGGETVGL
ITYMRTDGVQMAAEAIAATRDLIAKDFGKDYVPSAPRLYKTKAKNAQEAHECIRPTDLFR
RPDQVARYLDRDQLRLYELIWKRTVASQMAAAELDQVAVDVTSSGKDIVMRATGSVVVFE
GFLKVYREDRDDSPAPGAEDDESERLLPDVTEGEAMARQDVRADQHFTQPPPRFSEASLV
KRMEELGIGRPSTYASILSVLQDRNYVRLDQRRFIPEDRGRLVTAFLESYFGRYVEYNFT
ADLENQLDEVSDGKINWKKVLEDFWRQFQGAVEGTKELRVSEVIEKLDAELGAHFFPDDG
TGHDPRLCPLCNAGRLSLKLGKFGAFIGCANYPECRYTRPLAVAGEGGEGGGEPLPDGPK
ELGIEPGSGEPVTLRKGPYGWYVQLGEGAKPKRVSLYKGLEPGAIDLEIGLKLLALPRDV
GEHPETRKMIKAGVGRFGPYLLHDGVYKSLAKDDDVLTVGMNRAVELLSQAKGKAAGPLK
TLGEHDGKPVTVHEGRYGPYVSRDGVHATLPKGTDPLTVTLEQALPLIAAKAAKAPAKKP
ARKAAAPKKAAAEDGEATVTKKAPAKKAAAKKPAAKKAPAKKKAAG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcgtcgtcgaatctcccgccaaagccaagaccatcaacaagtatcttggc
tcggacttccaggtgctggcctcgtatggccatatccgtgatttgccggccaaggatggc
tcggtccgcccggacgagggctttgccatggactgggaggccgacgccaagagcgagcgc
cagatcaaggaaatcgccaacgccgtcaagaaggccgacaaactgttcctggccactgac
ccggatcgcgagggggaagccatctcgtggcacgtccaggcggtgctggaagccaagggc
gtgctgaagggcaaggaagtcaagcgggtggtcttcaacgagatcaccaaatccgccgtc
actgaggccatgcgcaacccgcgcgaggtgcaccaggatctggtcgacgcctatctggcc
cggcgtgcgctcgattatctggtcggcttcaccttgtcgccagtgctgtggcgcaagctg
ccgggctcgcgctcggccgggcgcgtgcaatcggtggcgctcaggctgatctgcgaacgc
gaaaccgagatcgagagtttcaaaagccaggaatactggaccctggccgccgatttcctg
accgccaagggcgccatgatcaccgccggcctgacccatctgaacgggggcaagctggac
aagttcgccctgggcaacgagacctccgctttggcggccaaggcggccatcgaagccgcc
agcttcaccgtcgccagcgtcgagcgcaagaaggccaagcgcaacccctacgcccccttc
accacctcgaccctgcaacaggaagccagccgcaagctgcattacggcgcgcagaagacc
atgcaactggcccagcgcctgtatgaaggcgtcgatatcggcggcgagacggtgggtctg
atcacctatatgcgtaccgacggcgtgcagatggccgccgaggccatcgccgccacccgc
gacctgatcgccaaggatttcggcaaggattacgtgccctccgccccgcgtctttataag
accaaggccaagaacgcccaggaagcgcatgaatgcatccgtcccaccgatctgttccgc
cgcccggatcaggtcgcccgttatctcgaccgcgaccagctgcgcctttatgaactgatc
tggaagcgtaccgtcgccagccagatggccgccgccgaattggatcaggtggccgtcgat
gtgaccagctctggcaaggacatcgtcatgcgcgccaccggttcggtggtggtgttcgag
ggcttcctgaaggtctatcgcgaggaccgcgacgacagtccggcgcccggggccgaggac
gacgaatctgaacgcctgttgcccgacgtcaccgagggcgaggccatggcccgccaggac
gtgcgcgccgaccagcacttcacccagccgccgccgcggttctcggaagcatcgctggtc
aagcgcatggaagaactgggcatcggtcgcccgtccacctatgcctcgatcctgtcggtg
ttgcaggaccgcaattacgtgcgtctggaccaacgccgcttcatccccgaggatcgcggg
cgtctggttaccgccttcctggaaagctatttcggtcgctacgtcgaatacaatttcacc
gccgatctggaaaaccagttggatgaagtttccgacggcaagatcaactggaaaaaggtt
ctggaagacttctggcgccagttccagggcgccgtcgagggcaccaaggaattaagggtg
tcggaagtcatcgaaaaactggacgctgaactgggggcgcatttcttccccgatgacggc
accggtcacgatccgcgcctgtgcccgctctgcaatgccgggcggctgtcgttgaagctg
ggcaagttcggcgccttcatcggctgcgccaattacccggaatgccgctatacccgtccg
ctggcggtggccggcgaaggcggcgaaggtggtggcgagccattgcccgatggccccaag
gaactagggatcgagcccggctcgggcgagccggttaccctgcgcaaaggcccctatggc
tggtacgtgcaattgggcgagggggccaagcccaagcgggtgtcgctatacaaggggctg
gaacccggcgccatcgacctggagatcggcctgaagctgctggccctgccgcgcgacgtc
ggcgagcacccggaaacccgtaagatgatcaaggccggcgtcggtcgtttcggcccctat
cttttgcatgacggcgtttacaagtcgttggccaaggatgacgatgtgctgacggtgggt
atgaaccgggcggtggaattgctgtcgcaggccaaaggcaaggccgccgggccgctgaag
accctgggcgagcatgacggcaagccggtgaccgtgcatgagggccgctatggcccctat
gtgtcgcgtgacggcgttcacgccaccctgcccaagggcaccgatccgttgacggtgacg
ctggaacaggccttgccgctgatcgctgccaaggcggccaaggcaccggcgaaaaagccg
gctcgcaaggctgcggcgccgaagaaggctgcggcggaagatggcgaggcgacggtgacg
aagaaggctccggccaagaaggccgccgccaagaagccggcggcgaagaaagcgccggcc
aagaagaaggcggcgggctga
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