Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__0557
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Entry
MGMSRv2__0557 CDS
T02960
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MGMSRv2__0557 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgy03019
]
MGMSRv2__0557 (recQ)
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__0557 (recQ)
Enzymes [BR:
mgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MGMSRv2__0557 (recQ)
Messenger RNA biogenesis [BR:
mgy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MGMSRv2__0557 (recQ)
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MGMSRv2__0557 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
CDK97772
UniProt:
V6EXE5
LinkDB
All DBs
Position
complement(604390..606246)
Genome browser
AA seq
618 aa
AA seq
DB search
MAGRQRLQCRPLPPAPLVMTASLASARACLSSVFGFDSFRPGQEDIITPILAGEDVLAIM
PTGAGKSLCYQLPAIIGDGLTVVVSPLIALMRDQVAQMTNYGVAAAAMNSANDSDESRRV
FDLIRRRELKLLYLAPERLARSETVDFLRRSGTARLAIDEAHCVSQWGHDFRPEYLALGE
FRRALGQVQTIAFTATADAATRADIAERLFDAPPRIFIGGFDRPNLMLAMQAKDSPRRQL
LGFLKERKGDSGIIYCSSRAGCEDLAQGLNDAGHRALVYHAGLDKGRRENNQDTFLREDG
IVMVATVAFGMGIDKPDVRFVAHADLPKSIEAYYQEIGRAGRDGLPAETLTLYGLGDVRL
RRQQIEDSQASDEQKRVERQKLNALLALCEAPRCRRQTLLSYFGETTQPCGHCDLCLNGA
QVRDGTVDAQKALSAIWRTGQRFGTEHLVNILIGQDNDNILRFGHDKLPTFGVGKDQSRD
QWRALFRQIYAGGLISQDLSEHGGWRITEQGGEVLRGRARIDVRTDTLKAKGKSKRDKPV
PAVLRNDIDHDLLAELKKLRRELATDQGIPAYAVFPDRTLIELAAERPTSLAEMRGIHGI
GEAKLERYGDLFLEVLLG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccggacgtcaaaggctacaatgccgccccttgccccctgccccgttggtcatgacc
gcttccctcgcctctgcccgcgcctgcctgtcctcggtattcggcttcgattcgtttcga
ccggggcaagaggatatcatcacccccatcctggccggcgaggatgtgttggccatcatg
cccaccggcgccggcaagtcgctgtgctaccaattgccggcgatcatcggcgatggcctg
accgtggtggtgtcgccgctgatcgcgctgatgcgtgatcaggtggcgcaaatgaccaat
tacggcgtggcggcggcggcgatgaattccgccaacgattccgacgaaagccggcgggtc
ttcgacttgatccgccgccgcgagctgaaattgctgtacctcgcccccgaacggctggcc
cggtcggaaacggtggatttcctgcgccgcagcggcaccgcccgtctggccatcgacgag
gcccattgcgtcagccagtggggccacgatttccgccccgaatatctggccttgggtgaa
ttccgccgtgcgctcggtcaggtccagaccatcgccttcaccgccaccgccgacgccgcc
acccgcgccgacatcgccgaacgcctgttcgacgcgccgccgcgcatcttcatcggcggc
ttcgaccggcccaatctgatgctggccatgcaggccaaggacagcccgcgccggcaattg
ctgggcttcctcaaagaacgtaagggcgacagcggcatcatctattgcagttcgcgcgcc
ggctgcgaggatctggcccagggtcttaacgatgccggccaccgcgccttggtctatcac
gccggcctggacaaaggccggcgcgaaaacaaccaggacaccttcctgcgcgaggacgga
atcgtcatggtcgccaccgtggcgttcggcatgggcatcgacaaacccgacgtgcgcttc
gtcgcccatgccgatctgcccaaatccatcgaagcctattatcaggaaatcggtcgcgcc
ggacgcgacggcttgccggcggaaaccctgaccctgtacggattgggcgatgtgcgcctg
cgccgccagcagatcgaggacagccaagcctcggacgaacaaaagcgggtggagcggcaa
aagctgaatgcgcttttggccttatgcgaggcccccaggtgccgccgccagaccctgctg
tcctatttcggcgagaccacccagccgtgcggccattgcgacctgtgcctcaacggcgcc
caggtgcgcgacggcacggttgacgcgcaaaaggcgctgtcggccatctggcgtaccggt
cagcgctttggcaccgagcatctggtcaacatcctgatcggccaggacaacgacaatatc
ctgcgcttcggccacgacaaattgcccaccttcggcgtcggcaaggaccaaagccgcgac
cagtggcgcgccttgttccggcaaatctatgccggcggcctgatcagccaggatctgtcg
gagcatggcggctggcgcattaccgaacaaggcggcgaggtgttgcgcggtcgcgcccgt
atcgacgtgcgtaccgacacgctgaaggccaagggtaagagcaaacgggacaagccggtg
ccagcggtgctgcgcaacgacatcgaccacgatctgctggcggaattgaagaagctgcgg
cgcgaactggccaccgaccagggcatcccggcctatgccgtgttccccgaccgcacgctg
atcgaactggccgccgagcgcccgacatcattggcggaaatgcgcggcatccacggcatc
ggcgaagccaagctggaacgctatggcgatctgttcctggaagttctgctggggtag
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