Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__0576
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Entry
MGMSRv2__0576 CDS
T02960
Name
(GenBank) conserved protein of unknown function, containing cadherin-like domian
KO
K20276
large repetitive protein
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MGMSRv2__0576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
He_PIG
Cadherin_3
Cadherin
Cadherin_4
Cadherin_5
Big_9
Motif
Other DBs
NCBI-ProteinID:
CDK97791
UniProt:
V6F0J6
LinkDB
All DBs
Position
618211..623577
Genome browser
AA seq
1788 aa
AA seq
DB search
MNAISRQYKRRPPKMKIGMMALEPRIMFDGAAIVDVVDKTVAADKSVAPPAVDTSAKSTV
AEIIAKADVQNTAVAITVVQSSAPATDASGSRNEVVVVDTTVVDWQTLVADMNPNIPLIL
LRPNADGMGELEVMAQALSQYSNLDAIHLVAEGRTGGIILAGQAIWNGSLDAASPYLAQI
GAALKPGGDFILYSCSVAGGEAGKAFIDDLSKAMGDVDIAASTDRTGPTILGGDWDLEYQ
TGDVETVLPFTLQGMQDISHCLGCTSSGSGGNEIIIGPDGITQWAHHKDSDASYGWVADV
AFTLNGINTNNQPLSIGAGVYTAAMAPVSEFIPQIVECSASPNTAPTFTGGANAGLTLSE
NATITTITTAMLEVKDAEQAANARTYTLTTAPTKGTLTKSGVTVSANGTFTQADIDAGNI
KYTPTANNIGADSLGFKVSDGTAELTNQTFSITISDVNPSISNNTVSWNENATGTVTTVT
PSTDTNGLTYAITAGNTGGAFAIDSSGQITVNTASAVDFETNPTFTLTVTVDDEDADTNA
DSTATITINLTNVNEAPVNTKPTTQSVAEDGTLTFSAGNGNALSVTDVDAGTTLTTVVSV
ASGKGTLAVTTGGGANITGDGSNSVTIVGTVAQVQNALSSVTYTPTANASGTGYATLTIQ
STDNGTGTLSDTDTVTIDVTAVADTPSVTNTSTTPGTQTTSGLVLSRNAADSTEVTHFKI
TGITNGNLFKNNGTTAINNGDFITFAEGNAGLKFTPTGGGDGSFTAQASTSAADGGLGGS
TVSAAIAVGMAVTSPTVNEDTDSGAITVTKGGAETHFKVTGITGGTLYSDAGFTSQVTDG
SFIAYGGATASLYFRPTAQRNTTTGGNGAFTVQASDGTTVSGTAVTSTITLTAIADTPTI
SSHTVTEDATSQAVTITRSANDGTETTHYKVTSITGGTLYSDVGLTQQISNNGFVASGGA
TTTVYFVPTANRNSTTGGNASFAVQASSSNADGGLGGSTATSTITLTPVADTPSVTNATT
NEDTQSSSGLVISRNAGDGAETTHFKITAITGGTLYKADGTTQISNGDFITFAEGNAGLK
FSPTANSSSNGSFAVEASTDGSTVAGSSAMATVTVNAVADTPAITNTSTTPGTQTTSGLV
LSRAAVDGAEITHFKVTGITNGNLFKNNGTTAINNGDFITFAEGNAGLKFTPTGGGDGSF
TAQASTSAADGGLGGSTVNAAIAVGAAVASPTLNEDTDSGAIAITKGNAETHYKITGITG
GALYSDAAFTQQVNNGDFIAQGGGGGNATTTNLYFRPTANRNSSNGGDGSFVVQASTSNA
DGGLTGSQITSAITLTAIADTPSVTNASTAPVTQTTSGLVLSRAAGDGAETTHFKITGIT
GGTLYKADGTTQITNGSFITFAEGNAGLKFTPSNGATSGAFTAQAAKAANDGGLGGSTVN
AAITVNTAPTASETALTPPGGDVGSAYTFTLPNGAFTDADEGDTLTYSASGLPPGLSINA
NTGVISGTPTNAGTSTVTITVTDAAGATATKTMSITVMAAPVAAPPPPPPPPPPAPIPVP
PPPPPPEPPPPPPPAPIPVPTPPALPPVESTLTRPATNAFQVVVAAKPAGGGDALVINAP
MRDAIVAEGARISVTIPTDTFAHTKADAVVSLTATRANGAALPGWMAFNPSTGTFEGTPP
PGFRGEVVVRVIARDNEGRQVVQTFKIVVGQGQGNAAPAEGGQGGGGRDGGQGEGQGQGG
PQAPGRTGDASPVGRPGLTAQLRALGQDGQATKQAVLFNALKTSGKAA
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccatctcccgccagtacaagcgccgcccccccaagatgaagatcggcatgatg
gcgctggagccgcgcatcatgttcgacggtgcggcaatcgtcgacgtggtggacaagact
gtcgcggcggacaaaagcgtggctccgcctgccgtggataccagcgccaaaagcacggtg
gccgagatcatcgccaaggccgatgtccagaacacggcggtagccattaccgtggtgcag
agcagcgccccggccaccgatgccagcggcagccggaacgaggtcgtcgtcgtcgatacc
accgtggttgattggcagaccctagtggcggatatgaaccccaatattccgctgattctg
ctgcgtcccaatgccgacggcatgggggaattggaggtgatggcccaggccctgtcgcaa
tacagcaacctggacgccatccatctggtggccgagggccgcaccggcggcatcatcctg
gccggccaggccatctggaacggcagcctggacgccgccagtccctatctggcccagatc
ggcgccgcgttgaagccgggcggcgacttcatactgtattcctgctcggtggccggcggc
gaggccggcaaggccttcatcgacgacctgtccaaggccatgggagacgtggacatcgcg
gcctcgaccgaccggaccggccccaccatcctcggcggcgactgggatctggaatatcag
acgggcgacgtggagacggtcctgccgtttaccctgcaaggcatgcaggacatcagccat
tgtttgggatgtacttccagtggatccggtggaaatgagattatcattggtccagacgga
attacccaatgggcacatcataaagatagcgatgcaagttatgggtgggttgccgatgtg
gcgtttactttaaatggtataaatacaaacaatcaacccttgtcgattggcgctggtgtc
tacacagctgcaatggccccagtaagtgagtttattccccaaatagtcgagtgcagcgca
tcccccaacaccgctcccaccttcaccggcggcgccaatgccggcttgaccctgtcggaa
aacgccaccatcaccaccatcaccacggcgatgctggaggtgaaggacgccgagcaggcg
gctaatgcgcggacctataccctgaccaccgcgccgaccaagggcaccctgaccaaaagc
ggcgtgacggtatcggccaacggcaccttcacccaggccgacatcgatgccggtaacatc
aagtacacgcctaccgccaacaacatcggggccgacagccttgggttcaaggtatcggac
ggcaccgccgaactgaccaaccagaccttcagcatcaccatcagcgacgtcaacccaagt
atttccaacaacacggtgtcgtggaacgaaaatgccaccggcacggtgaccacggtgaca
cctagcaccgacaccaacggattgacctatgccatcaccgccggcaacaccggcggcgcc
ttcgccatcgacagcagcggccagatcaccgtcaacaccgcctcggcggtggatttcgag
accaatcccacctttaccctgacggtgacggtggatgacgaggacgccgacaccaacgcc
gattccaccgccaccatcaccatcaacctgaccaacgtcaacgaggcaccggtcaacacc
aagcccaccacccaaagtgtggccgaggacggcacgctgaccttctcggccggcaacggc
aacgccctgtcggtgaccgacgtcgatgccggcaccactttgaccacggtggtttccgta
gcctcgggcaagggcacgctggcggtgaccaccggcggtggcgccaacatcaccggcgac
ggcagcaattcggtgaccatcgtcggcaccgtggcgcaggtgcagaacgccctgtccagc
gtgacctatacccccacggccaatgccagcggcaccggctatgccacgctgaccatccaa
tccaccgacaacggcaccggcacgctgagcgacaccgacacggtgaccatcgacgtcacc
gcggtggccgacacgccatccgtcaccaacaccagcaccacgcccggcacccagaccacg
tccgggctggtgctgtcgcgcaatgccgccgacagcaccgaggtgacccatttcaagatc
accggcatcaccaacggcaatctgttcaagaacaacggcaccaccgccatcaacaacggc
gatttcatcaccttcgccgagggtaatgcggggctgaaattcacccccaccggcggcggc
gatggcagtttcaccgcccaggcgtcgaccagtgccgccgatggcggtctgggcggcagc
acggtcagcgccgccatcgccgtgggcatggcggtaaccagcccgacggtgaatgaagac
accgattcgggtgccatcaccgtgaccaagggtggggccgagactcatttcaaggttacc
ggcatcactggcggcacgctttattccgatgccgggttcacctcccaggtgaccgatggc
agcttcatcgcctatggcggcgccaccgccagcctgtatttccggcccaccgcccaacgc
aacaccaccaccggcggcaacggcgcctttaccgtgcaggcgtcggacggcaccactgtc
agcggcacggcggtgaccagcaccattaccctgaccgccatcgccgacacgccgacgatc
agcagccacaccgtcaccgaggatgcgacatcgcaggcggtcaccatcacccgctcggcc
aatgacgggacagagaccacccattacaaggtgacctccatcaccggcggcacgctttat
tctgatgtcgggctgacccagcagatcagcaataacggtttcgtcgccagcggtggggcc
accaccaccgtctattttgtgcccacggccaaccgcaacagcaccaccggcggcaacgcc
agtttcgcggtgcaggcgtcgtcatccaatgccgatggcggtctgggcggcagcaccgcc
accagcaccatcaccttgaccccagtggccgatacgcccagcgtcaccaacgccactacc
aacgaggacacgcaaagcagctcgggtctggtgatcagccgcaatgccggcgacggggcg
gaaaccacccatttcaagatcaccgccatcaccggcggcacgttgtacaaggccgacggc
accacccagatcagcaacggcgacttcatcaccttcgccgagggcaatgccgggctgaag
ttcagccccaccgccaattcctccagcaatggcagcttcgcggtggaggcatccaccgac
ggcagtacggtcgccggatcgtcggcgatggcgacggtgacggtgaacgcggtggccgac
acgcccgccatcaccaataccagcaccacgcccggcacccagaccacatccggtctggtg
ctaagccgcgcggcggtggacggagccgagataacccatttcaaggtcaccggcatcacc
aacggtaatctgttcaagaacaacggcaccaccgccatcaacaacggcgatttcatcacc
ttcgccgagggcaatgccgggctgaaattcacccccaccggcggcggcgatggcagtttc
accgcccaggcgtcgaccagtgccgccgatggcggtctgggcggcagcacggtcaatgcc
gccatcgccgtgggtgcggcggtggccagcccgaccctcaacgaagacaccgattccggc
gccatcgccattaccaagggcaatgccgagacccattacaagatcaccggcatcaccggc
ggcgcgctttactccgatgcggccttcacccaacaggtcaataacggcgatttcatcgcc
caaggcggcggtggcggcaacgccaccaccaccaacctgtatttccgtcccaccgccaat
cgcaattccagcaatggcggcgatggcagcttcgtcgtccaggcatcgacctccaatgcc
gatggcgggctgaccggtagccagatcaccagcgccatcaccctgaccgccatcgccgac
acgccatcggtcaccaatgccagcacggcgcccgtcactcagaccaccagcgggctggtt
ctcagccgtgccgccggcgacggggcggaaaccacccatttcaagatcaccggcatcacc
ggcggcacgctgtacaaagccgacggcaccacccagatcaccaacggcagcttcatcacc
ttcgccgagggcaacgccggcctgaaattcacgccgtccaatggcgccacttcgggggcc
ttcaccgcccaggcggccaaggccgccaatgatggtggattgggtggcagcacggtcaat
gccgccatcaccgtcaacaccgctccgacggcctctgagaccgccttgacgccgccgggc
ggcgacgtcggttcggcttatacgttcaccttgccgaacggcgccttcaccgatgccgat
gaaggcgacaccctgacctatagcgccagcggcctgccgccagggctgagcatcaatgcc
aataccggtgttatttcgggcaccccgaccaatgccggcaccagcaccgtgaccatcacc
gtcaccgatgccgccggggcgacggcgaccaagaccatgtccatcacggtgatggcggcc
ccagtggcggcaccgccaccaccaccaccaccgccgccgccggctccgattccggtgccg
ccgccaccaccaccaccggaaccgccgccgccaccgccgccggctccgattccggtgccg
acaccgcccgctctgccgccggtggaaagcaccctgacccgcccggcgaccaatgccttc
caggtggttgtcgccgccaagccggccgggggcggcgatgccctggtgatcaacgcgccc
atgcgtgacgcgatcgtggccgagggtgcgcgcatctcggtgaccattcccaccgacacc
ttcgcccataccaaggccgacgcggtggtgtcgctgacggcgacccgggccaatggcgcg
gcgctgccgggctggatggcgttcaatccctccaccggcactttcgagggaacaccgcca
cccggtttccgtggcgaggtggtggtgcgcgtcatcgcccgcgacaacgaaggccgccaa
gtggttcagaccttcaagatcgtcgtcggccagggccagggcaatgccgcgccggcagag
ggcggccaaggtggtggcggtcgtgacgggggccagggtgaaggccagggccagggcggt
ccgcaagctcccggtcgcaccggcgacgcatccccggttggccgtcccggcctgacggcg
caattgcgggcgctgggccaggatggccaggcgaccaagcaggcggttttgttcaacgca
ttgaagaccagcggcaaggccgcgtag
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