Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__0955
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Entry
MGMSRv2__0955 CDS
T02960
Symbol
rpoH
Name
(GenBank) sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins
KO
K03089
RNA polymerase sigma-32 factor
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgy03021
]
MGMSRv2__0955 (rpoH)
Transcription machinery [BR:
mgy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MGMSRv2__0955 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
Sigma70_r3
UCR_14kD
HTH_3
HTH_11
HTH_20
HTH_50
DUF3431
HTH_6
Motif
Other DBs
NCBI-ProteinID:
CDK98170
UniProt:
V6EY34
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All DBs
Position
998501..999373
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AA seq
290 aa
AA seq
DB search
MRATVPAISADDSGLSKYLREIRDFPVLEPEQEYMLAKRWVDYEDTAAAHQLVTSHLRLV
AKIAMGYRHYGLPMADLISEGNLGLMRAVKKFEPERGFRLSTYAMWWIKASLNEFVLNSW
SLVKIGTLAAQKKLFFNLRKVKTKLRLLDATELAPADVRAIAKELGVSETDVVNMNRRMG
GRDSSLNTPVGESGTEIIELLPDETDNQETGLAKHEELSKGRKLIAQALGSLNEREREIF
VERRLRDEPMTLEELGARFGVSRERIRQIEVKAFEKVRTLVSAGFLPATA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccactgtgcccgccatttccgctgacgatagcggcttgtccaagtatctgcgc
gaaattcgcgactttccggtgttggagccggaacaggaatacatgctggccaagcgctgg
gtcgattatgaagacaccgccgccgcccaccagttggtgaccagccatctgcgtctggtg
gccaagatcgccatgggataccgccattacggcctgcccatggccgatctgatttccgag
ggtaatctgggcctgatgcgggcggtaaagaagttcgagccggaacgcgggttccgcctg
tccacctatgccatgtggtggatcaaggcgtcgttgaatgaattcgtgctcaattcctgg
tccttggtcaaaatcggcaccttggcggcgcaaaagaagctgttcttcaacctgcgcaag
gtgaagaccaagctgcggctgctggacgccaccgaactggcccccgccgatgtccgcgcc
atcgccaaggaattgggggtgtccgaaaccgacgtcgtcaatatgaaccggcgcatgggc
ggacgcgattcgtcgctcaacaccccggtgggggaaagcggcaccgagatcatcgagttg
ctgcccgacgagaccgacaaccaggaaaccggtctggccaagcacgaggaattgtccaag
gggcgcaagctgatcgcccaggccctgggcagcctgaacgagcgtgagcgtgaaatcttc
gtcgaacgccgtttgcgcgatgaacccatgaccctggaggaattgggggcgcgtttcggt
gtcagccgtgaacgcatccgccagatcgaggtcaaggcgttcgagaaagtccgcaccctg
gtatccgccggtttcctgccggcgacggcgtaa
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