Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__0971
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Entry
MGMSRv2__0971 CDS
T02960
Symbol
lpD
Name
(GenBank) Dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00010
Glycolysis / Gluconeogenesis
mgy00020
Citrate cycle (TCA cycle)
mgy00260
Glycine, serine and threonine metabolism
mgy00280
Valine, leucine and isoleucine degradation
mgy00310
Lysine degradation
mgy00380
Tryptophan metabolism
mgy00620
Pyruvate metabolism
mgy00630
Glyoxylate and dicarboxylate metabolism
mgy00640
Propanoate metabolism
mgy00670
One carbon pool by folate
mgy00785
Lipoic acid metabolism
mgy01100
Metabolic pathways
mgy01110
Biosynthesis of secondary metabolites
mgy01120
Microbial metabolism in diverse environments
mgy01200
Carbon metabolism
mgy01210
2-Oxocarboxylic acid metabolism
mgy01240
Biosynthesis of cofactors
Module
mgy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mgy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mgy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mgy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MGMSRv2__0971 (lpD)
00020 Citrate cycle (TCA cycle)
MGMSRv2__0971 (lpD)
00620 Pyruvate metabolism
MGMSRv2__0971 (lpD)
00630 Glyoxylate and dicarboxylate metabolism
MGMSRv2__0971 (lpD)
00640 Propanoate metabolism
MGMSRv2__0971 (lpD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MGMSRv2__0971 (lpD)
00280 Valine, leucine and isoleucine degradation
MGMSRv2__0971 (lpD)
00310 Lysine degradation
MGMSRv2__0971 (lpD)
00380 Tryptophan metabolism
MGMSRv2__0971 (lpD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MGMSRv2__0971 (lpD)
00670 One carbon pool by folate
MGMSRv2__0971 (lpD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgy04147
]
MGMSRv2__0971 (lpD)
Enzymes [BR:
mgy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MGMSRv2__0971 (lpD)
Exosome [BR:
mgy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MGMSRv2__0971 (lpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
DAO
GIDA
NAD_binding_8
FAD_binding_2
HI0933_like
FAD_binding_3
2-Hacid_dh_C
AlaDh_PNT_C
3HCDH_N
Thi4
NAD_binding_7
Amino_oxidase
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
CDK98186
UniProt:
V6F1K7
LinkDB
All DBs
Position
1016130..1017524
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AA seq
464 aa
AA seq
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MSDNTFDVVVIGGGPGGYVAAIRAAQLGMKTALVEREHLGGICLNWGCIPTKALLRSADI
FRTMQHASAYGLSAPGASFDLAAIVKRSRGVSAQLSAGVKGLLKKNKVTVFDGVGKLAGK
GKVAVAGKNNVTLSGKHIILATGGRARIIPGLEPDGKFVWTYKEALVPDTVPKALLVIGS
GAIGIEFASFFNALGAQVTVVEMMDRVMPVEDEEISALARKQFEKQGMRIITNATVKGLK
KSANNVSVQVDVGGKVEDIVVDRVISAVGIVANVEDIGLEGTKIKVDRGHVVTNKWCETD
EPGVYAIGDLTAPPWLAHKASHEGVICVEKIAGIKDVHPLENSKIPGCTYCHPQVASVGL
SEKKAIEKGYQVKVGRFPFIGNGKAIALGEPEGLIKTVFDAKTGELLGAHMIGAEVTEMI
QGYTIAKTLETTEAELMHTVFPHPTLSEMMHEAVLSAYGRAIHF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaacactttcgacgtggtggtcatcggcggcggtcccggcggctatgtggcc
gccatccgcgcggcgcagctggggatgaagaccgcgctggtggaacgcgagcatctgggc
ggcatctgcctgaactggggctgcatcccgaccaaggccttgctgcgctccgccgacatc
ttccgcaccatgcagcatgcttccgcctatggcctgtcggcgccgggcgccagcttcgat
ctggccgccatcgtcaagcggtcgcgcggggtgtcggcgcaattgtcggccggcgtcaag
ggcctgctgaaaaagaacaaggtcaccgtgttcgacggtgtcggcaagctggccggtaaa
ggtaaggtcgccgtggccggcaagaacaacgtgacgctgtcgggcaagcacatcatcctg
gccaccggcggtcgggcgcgaatcattcccggcctggagcccgacggcaagttcgtctgg
acctacaaggaagccctggtccccgataccgtgccgaaagctttgctggtcatcggctcg
ggcgccatcggcatcgagttcgccagcttcttcaacgccctgggcgcccaggtcaccgtc
gtcgagatgatggaccgggtgatgccggtggaggacgaggaaatcagcgccctggctcgc
aagcagttcgagaagcagggcatgcgcatcatcaccaacgccacggtcaagggcctgaag
aaatcagccaataacgtctcggtgcaggtggatgtgggcggcaaggtggaagacatcgtc
gtcgaccgggtgatttccgccgtcggcatcgtcgccaacgtggaagacatcggcctggaa
ggcaccaagatcaaggtcgatcgcggccatgtggtcaccaacaagtggtgcgaaaccgac
gagccgggtgtttacgccatcggcgacctgacggcgccgccatggctggcgcacaaggcc
agccatgaaggcgtcatctgcgtcgagaagatcgccggcatcaaggacgtgcacccgctg
gaaaattccaagattcccggctgcacctattgccacccacaggtggccagcgtcgggttg
tcggaaaagaaggccatcgagaagggctatcaggtcaaggtcggtcgtttccccttcatc
ggcaacggcaaggccattgcgctgggcgagccggagggcctgatcaagaccgtgttcgac
gccaagaccggcgagcttctcggcgcccacatgatcggggccgaggtgacggaaatgatc
cagggctataccatcgccaagaccctggaaaccaccgaggccgagctgatgcacaccgtc
ttcccgcatccgaccctgtcggaaatgatgcatgaagcggtgttgtcggcttacggtcgg
gccattcatttttag
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