Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__2495
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Entry
MGMSRv2__2495 CDS
T02960
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00470
D-Amino acid metabolism
mgy00550
Peptidoglycan biosynthesis
mgy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MGMSRv2__2495 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MGMSRv2__2495 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgy01011
]
MGMSRv2__2495 (murD)
Enzymes [BR:
mgy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MGMSRv2__2495 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mgy01011
]
Precursor biosynthesis
Amino acid ligase
MGMSRv2__2495 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_2
2-Hacid_dh_C
NAD_binding_7
TrkA_N
F420_oxidored
KARI_N
GFO_IDH_MocA
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
CDK99710
UniProt:
V6F2F6
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All DBs
Position
2602938..2604329
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AA seq
463 aa
AA seq
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MIRVPFLTDKRVVVLGLGKSGSATLRALVESGARVTGWDDNQAARDAAQAAGIPLADPLA
LDLSEVDMIVWSPGIPHTFPQPHPLAEAARAADIPLVCDIELLAIAKPDAKFVLITGTNG
KSTTTTLVAHILTSAGIANAAGGNLGTAALDLPDLDADGIYVLELSSYQLELTRSLRARA
GVLLNITPDHLGRHGGMDGYIAAKRRLYDFIAADGVSVIGLDDAPTRGIADWLLGAGHRH
TAISVKQVLDHGISAPDGILRQDGVEIFDLTAIATLPGRHNWQNACAAFALVSAVGVPST
AIAAGIASYPGLAHRQQLVGTKAGVRFINDSKATNAEAAEVALVCYDAIHWIIGGQAKEG
GIASLERHFHRIKHAYLIGDAAPAFAETLAGKVAFTQCGSLDRAVTAAAANAQAGEVVLL
SPACASWDQFKSFEHRGEIFRQLVEALPRVEDAAPSQTAGRPQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgtccccttcctgaccgataagcgtgtggtggtgctgggcctgggcaagtcc
ggcagcgccaccttgcgcgccttggtcgaaagcggcgcgcgggtcaccggctgggacgac
aatcaagccgcccgcgatgcggcccaagccgccggcatccccctggccgatccgctggcc
cttgatctgtcagaggtcgacatgatcgtgtggagcccgggcatcccccacaccttcccg
caaccgcatccgttggccgaggcggcgcgggccgccgacattccgctggtctgcgatatt
gaattgctggcgatcgccaagcccgacgccaaattcgtgctgatcaccggcaccaacggc
aagtcgaccaccaccaccctggtcgcccatatcctcaccagtgccggcatcgccaatgcc
gccggcggcaatctgggcacagccgcccttgacctgcccgatctggatgccgacggcatc
tatgtgctggaactgtcgtcctatcagttggaactgacccgaagcttgcgggcgcgggcc
ggcgtgctgttgaacatcacccccgaccatctgggacgccatggcggcatggatggctat
atcgccgccaaacgccggttgtacgacttcatcgctgccgacggcgtctcggtcatcggt
ctcgacgacgcgccgacgcgcggcatcgccgactggctgttgggcgccggtcaccggcac
accgccatttcggtcaagcaggtgctggaccacggcatcagcgcccccgacggcatcttg
cgccaggacggcgtcgaaatcttcgacctgaccgccatcgccaccctgcccggtcgccac
aactggcaaaacgcctgcgccgctttcgccctggtcagcgccgtgggcgtaccgtccacc
gccatcgccgccggcatcgccagctatcccggtctggcccatcgccagcaattggtcggc
accaaggcgggcgtgcgcttcatcaacgattccaaggccaccaacgccgaagcggcggaa
gtggccctggtctgctatgacgcgattcactggatcatcggcggccaggccaaggaaggc
ggcatcgccagcctggaacgtcacttccaccgcatcaaacacgcttatctgatcggcgat
gccgccccggccttcgccgagacactggccggcaaggtcgccttcacccaatgcggcagc
ttggaccgcgccgtgaccgcagctgccgccaacgcccaagcgggtgaagtggtgctgctg
tcgccggcctgcgcctcgtgggaccagttcaaaagcttcgagcatcgcggcgaaatcttc
cgccagttggtggaggcgctgcctcgtgtcgaagacgcggcgccgtcacagacggcgggg
aggccccaatga
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