Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__2607
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Entry
MGMSRv2__2607 CDS
T02960
Symbol
hupB
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgy03032
]
MGMSRv2__2607 (hupB)
03036 Chromosome and associated proteins [BR:
mgy03036
]
MGMSRv2__2607 (hupB)
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__2607 (hupB)
DNA replication proteins [BR:
mgy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MGMSRv2__2607 (hupB)
Chromosome and associated proteins [BR:
mgy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MGMSRv2__2607 (hupB)
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MGMSRv2__2607 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Ldh_2
Ribosomal_L12
HU-HIG
HU-CCDC81_bac_2
Phe_hydrox_dim
Motif
Other DBs
NCBI-ProteinID:
CDK99822
UniProt:
V6F367
LinkDB
All DBs
Position
2708569..2708832
Genome browser
AA seq
87 aa
AA seq
DB search
MSKTAISKAIRTATGCTAAQADEAVDALVATILDGVKSEGRFRMIGFGTFSKSERPARQG
RNPQTGKTIEIAASSTIKFKASSSLKK
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaccgcgatttccaaagccatccgcaccgccaccggctgcaccgccgcccag
gccgacgaagctgtcgatgccttggtggccaccattctggatggcgtgaagtccgaaggc
cgcttccggatgattggatttgggaccttctcgaagtccgagcgcccggcccggcagggc
cgcaatccccagaccggcaagaccattgagatcgcggcgtcctcgaccatcaagttcaag
gcgtcgtcgtcgctgaagaaatag
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