Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__2690
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Entry
MGMSRv2__2690 CDS
T02960
Symbol
dnaX
Name
(GenBank) DNA polymerase III/DNA elongation factor III, tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03030
DNA replication
mgy03430
Mismatch repair
mgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MGMSRv2__2690 (dnaX)
03430 Mismatch repair
MGMSRv2__2690 (dnaX)
03440 Homologous recombination
MGMSRv2__2690 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgy03032
]
MGMSRv2__2690 (dnaX)
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__2690 (dnaX)
Enzymes [BR:
mgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MGMSRv2__2690 (dnaX)
DNA replication proteins [BR:
mgy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MGMSRv2__2690 (dnaX)
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MGMSRv2__2690 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_16
AAA_22
AAA_30
RuvB_N
AAA_5
AAA_14
AAA_19
AAA_18
DUF815
AAA_24
ResIII
AAA_assoc_2
AAA_2
Mg_chelatase
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
CDK99905
UniProt:
V6F2Z7
LinkDB
All DBs
Position
complement(2789899..2791659)
Genome browser
AA seq
586 aa
AA seq
DB search
MTDTVQPTPYRVLARKYRPTDFATLIGQDAMVRTLTNAIASGRLAHAFVLTGVRGVGKTT
TARIIARALNCIGPDGQGGPTIDPCGQCEHCRAIAEDRHVDILEMDAASRTGVNDIREII
ESVRYRPTSARFKVYIIDEVHMLSTAAFNALLKTLEEPPEHVKFIFATTEIRKIPVTVLS
RCQRFDLRRVEMEVLTKHFAAIADTEGAEIEPAALRLIARAADGSVRDGLSLLDQAISHG
AGLVSEAQVRDMLGLADRARVFDLFELVMKGQMAPALDLLAEQYALGADPAVVVQDMLEL
AHWLTRLKITPDAADSSAASETEKVKGTQMAGDLSMAQLTRTWQMLLKGLAEVRSAPNPL
QAAEMSLVRLAYVADLPSPADLIQQLRDNPPSPRGPGGGGAPAPGGGGTVALSTQMVSPG
SMGGPSAALKMEPALAAQPIHLPAMPASFAEVVALFSEKREGVLAVHLRNQVNPVKFEAG
RIEFRPHKSAPHDLAPRVSRLLSEWTGRRWTVTVNLTDPADPTLSEQEALAEHKRREDAA
NHPLVRAVLDAFPGAAIEIVRDLVEAEPEESDLAFDADLTPGEEEL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgttcagcccacgccttaccgcgtccttgcccgcaagtaccgtccgacc
gatttcgccaccctgatcggtcaggacgccatggtgcggacgctgaccaacgccatcgcc
tcgggtcggttggcccatgccttcgtgctgaccggcgtgcgcggtgtgggcaagacgacg
acggcgcggatcatcgcccgcgccctcaactgtatcggccccgatggccagggcggcccg
accatcgacccctgcggccagtgcgaacattgccgggccatcgccgaggatcgccacgtc
gatatcctggagatggacgccgccagccgcaccggcgtgaacgatatccgcgagatcatc
gaaagcgtgcgctaccggccgacctcggcccggttcaaggtctatatcatcgacgaagtg
cacatgctgtccaccgccgccttcaatgccctgttgaagacgctggaagaaccgccggaa
catgtgaagttcatcttcgccaccaccgaaatccgcaagattccggtcaccgtgctgtcg
cgctgccagcgtttcgacctgcgccgggtggaaatggaggtgttgaccaagcatttcgct
gccatcgccgacacggaaggggccgagatcgagccggccgccctgcgcctgatcgcgcgc
gccgccgacggctcggtgcgcgacgggctgtcgctgttggatcaggccatctcccacggc
gccgggctggtgtcggaagctcaggtgcgcgacatgctggggctggccgaccgcgcccgt
gtcttcgatctgttcgaattggtgatgaaggggcagatggccccggcactcgatctgctg
gcggaacaatatgccctgggcgccgatccggcggtggtggtgcaggacatgctggaactg
gcccattggctgacccggctgaagatcacccccgacgcagccgattcctccgccgcctcg
gaaaccgaaaaggtcaagggcacgcagatggccggcgatctgtccatggcccaactgacc
cgcacctggcagatgctgttgaaggggctggccgaggtgcgctcggcccccaatccgttg
caggcggcggaaatgtcgctggtgcggttggcctatgtcgccgatctgcccagtcccgcc
gatctgatccagcaattgcgcgacaacccgccgtcaccgcgtggtcccggcggcggcggc
gctcccgctcccggtggtggcggaaccgttgccttatcgacacaaatggtgtcccccggt
tccatgggcgggccgagcgcggccttgaagatggagccggccttggccgcccaacccatc
cacctgccggccatgccggccagctttgccgaagtggtggcgctgttctcggaaaagcgc
gaaggcgtgctggccgtgcatttgcgcaatcaggtcaatccggtcaagttcgaggcgggg
cgcatcgagttccgtccccataaaagcgcgccgcacgatctggcgccgcgcgtctcgcgc
ctgctgtcggaatggaccgggcggcgctggaccgtcaccgtcaatctgactgaccccgcc
gatccgacgctgtcggaacaagaggccttggccgaacacaagcggcgcgaggacgcggcc
aaccatccgctggtccgcgccgttctcgatgcctttcccggtgccgccatcgaaatcgtc
cgcgatctggtggaagcggaaccggaagaaagcgatctggcctttgacgccgatttgacc
ccaggagaagaggaactatga
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