Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__2893
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Entry
MGMSRv2__2893 CDS
T02960
Symbol
mutM
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MGMSRv2__2893 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__2893 (mutM)
Enzymes [BR:
mgy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MGMSRv2__2893 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MGMSRv2__2893 (mutM)
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MGMSRv2__2893 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CDL00108
UniProt:
V6F6I8
LinkDB
All DBs
Position
2993130..2993966
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AA seq
278 aa
AA seq
DB search
MPELPEVETVARGLAAVWPGHRFIRVEARRPDLRKPLPADFAARLTGRRVESVGRRAKYL
LVHLDDGLTLLGHLGMSGAMVISKGRNEPPGPHDHVEFLSEDGTMVTYRDPRRFGLMDLT
LDPTSHPLLAHLGPEPLGPDFHEKALAAALDGKGASIKAALLDQNVVAGLGNIYVSESLF
LSGIDPTRAAGSLKPREINKLVPAIRAVLERAIAAGGSSLKDHVQPNGELGYFQHSFTVY
DRAGEACPGCDCDIARTGGIQRIVQSGRSTFYCAKKQR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaagtcgaaaccgtcgcccgtggactggccgctgtgtggcccgga
caccgattcatccgcgtcgaggcccgccgccccgatctgcgcaagcccctgcccgccgat
ttcgccgcccgtctgaccgggcgccgcgtcgaaagcgtcggacgccgcgccaagtatctg
ctggtccacctcgacgacggcctgacgctgttgggccatctgggcatgtcgggggccatg
gtcatcagcaaaggccgcaacgagccgccggggccgcacgaccatgtggaattcctaagc
gaagacggcaccatggtcacctatcgcgacccgcgccgcttcggcctgatggacctgacc
cttgacccgacatcgcatccgctgctggcccatctggggccggagccgctggggccggat
ttccatgaaaaagccttggcggcggcactggatggcaagggcgcctcgatcaaggcggcg
ctgttggaccagaacgtggtcgccggcctgggcaacatctatgtgtcggaaagcctgttc
ctgtcgggcatcgatcccacccgcgccgccggatcgctgaaaccgcgtgaaatcaacaag
ctggtgccggccatccgcgccgtactcgaacgcgccatcgccgccggcggctcgtctttg
aaagatcatgtgcagcccaatggcgaattgggctatttccagcattccttcaccgtctac
gaccgggcgggggaagcgtgtcccggctgcgattgcgatatcgcccgcaccggcggcatt
caacggatcgtccagtcggggcgatccactttctactgtgcgaaaaaacagcgttga
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