Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3308
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Entry
MGMSRv2__3308 CDS
T02960
Symbol
dnaQ
Name
(GenBank) DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03030
DNA replication
mgy03430
Mismatch repair
mgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MGMSRv2__3308 (dnaQ)
03430 Mismatch repair
MGMSRv2__3308 (dnaQ)
03440 Homologous recombination
MGMSRv2__3308 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgy03032
]
MGMSRv2__3308 (dnaQ)
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__3308 (dnaQ)
Enzymes [BR:
mgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MGMSRv2__3308 (dnaQ)
DNA replication proteins [BR:
mgy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MGMSRv2__3308 (dnaQ)
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MGMSRv2__3308 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Amidohydro_3
Motif
Other DBs
NCBI-ProteinID:
CDL00523
UniProt:
V6F7R0
LinkDB
All DBs
Position
complement(3385367..3386053)
Genome browser
AA seq
228 aa
AA seq
DB search
MREIVLDTETTGFDPLTGHRIVEIGCVELFNHLPTGKVYHQYVNPERDMPEEAFKVHGLS
EQFLSDKPVFAEIVADFMDFIGDAILVIHNAEFDMRFINAELSRLGFQPLPMSRSIDTVA
MARKKFPGAQANLDALCRRFEIDNTHRSFHGALLDSELLAEVYLQLIGGRQPGLELGLLG
GNGKGGGGPVLERVKREPRPHAALPEELEAHAAFVGKLKKALWLREPE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtgcttgatacggaaaccaccggcttcgatccgctgaccggccatcgc
atcgtcgaaatcggctgtgtcgagctgttcaaccacttgcccaccggcaaggtctatcac
caatacgtcaaccccgagcgcgacatgccggaagaggcgttcaaggtgcacggcctgtcc
gagcaattcctgtcggacaagccggtcttcgctgaaatcgtcgccgatttcatggacttc
atcggcgacgccatcctggtgattcataacgctgaattcgacatgcgtttcatcaatgcc
gagctgtcgcggctgggtttccaacctttacccatgagccgctccatcgataccgtggcc
atggcgcgcaagaagttccctggtgctcaggccaatctcgacgccctgtgccgtcgcttt
gaaatcgacaacacccaccgttccttccacggcgcgctgttggattcggaattgctggcc
gaggtctatctgcaactgatcggcggacgccagcccggtttggaactgggacttctgggc
ggcaacggcaagggcggcggcggtccggtgctggaacgggtcaagcgcgaaccgcgtccg
cacgcggccctgccggaggaactggaggcgcatgcggcctttgtcggcaaactgaagaaa
gccctctggctgcgcgagccggagtaa
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