Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3397
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Entry
MGMSRv2__3397 CDS
T02960
Name
(GenBank) putative nucleotide sugar epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00521
Streptomycin biosynthesis
mgy00523
Polyketide sugar unit biosynthesis
mgy00541
Biosynthesis of various nucleotide sugars
mgy01100
Metabolic pathways
mgy01110
Biosynthesis of secondary metabolites
mgy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MGMSRv2__3397
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MGMSRv2__3397
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MGMSRv2__3397
Enzymes [BR:
mgy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MGMSRv2__3397
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
CDL00612
UniProt:
V6F5G1
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All DBs
Position
complement(3469554..3470000)
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AA seq
148 aa
AA seq
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MIDGVVLTPLRRIADDRGAVMHMLRVDSPVFQQFGEIYFSSVHPGKIKAWHYHHRMSLNY
AVPVGRINFVLFDPRPHSLTHGQVQEIALGDDDYALVSVPPGLWTGFQCVGGETALVANC
ATLAHDPSEGERKDHDDPSIPYVWRERP
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacggtgtcgtcctcaccccgttgcgccgtatcgccgacgaccggggcgcggtg
atgcatatgttgcgcgttgattctccggttttccagcaattcggcgagatttacttttcc
tcggtccatcctggcaagatcaaggcctggcactaccaccaccgcatgagcctgaactac
gcggtaccggtgggccgcatcaatttcgtcctgttcgatcctcgcccacacagccttacc
catggtcaggtgcaggaaatcgctttgggcgatgatgattatgccctggtcagcgtaccg
ccgggcttatggaccggctttcaatgcgtcggcggagaaaccgccctggtcgccaattgc
gccacccttgcccatgacccgagcgagggtgaacgcaaggatcatgacgacccgtccatc
ccctatgtctggcgggagaggccatga
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