Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3567
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Entry
MGMSRv2__3567 CDS
T02960
Symbol
dapE
Name
(GenBank) N-succinyl-diaminopimelate deacylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00300
Lysine biosynthesis
mgy01100
Metabolic pathways
mgy01120
Microbial metabolism in diverse environments
mgy01230
Biosynthesis of amino acids
Module
mgy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MGMSRv2__3567 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mgy01002
]
MGMSRv2__3567 (dapE)
Enzymes [BR:
mgy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
MGMSRv2__3567 (dapE)
Peptidases and inhibitors [BR:
mgy01002
]
Metallo peptidases
Family M20
MGMSRv2__3567 (dapE)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
CDL00782
UniProt:
V6F602
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All DBs
Position
3647541..3648683
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AA seq
380 aa
AA seq
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MNLSDPVGLTAELIKCASVTPEDAGARDLLAGWLRELGFDCHAVDSATGGPLIRNLYARR
GSDGINFCFAGHTDVVPVGASGWSVEPFAGTILNNRLYGRGATDMKGAIACFVAAVSRFV
AKGQPAGSISLLITGDEEGPAVDGTVKVLDWLKVRGERLDMCLVGEPTNPGRLGEMMKIG
RRGSLNCRITVFGTQGHSAYPHLADNPIPRLLAMLNALTAEPLDHGSPHFQASTLALTTV
DVGNAATNVIPAQARAGFNIRFNDLHSGKSLEQWIRHTLDSVGGDYECKIEVSGESFLTE
PGVLSEAVAECARAVTGLTPELSTTGGTSDARFIKNHCPVLEFGLVSQTMHKVDEYVAVD
DLEALTQIYLGVLERLVGSQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtccgaccccgtcggcctgaccgccgaactgatcaaatgcgccagcgtcacc
cctgaggatgccggcgcccgcgacctgttggccggttggctgcgggaactgggttttgat
tgccatgcggtggattccgccaccggtgggccgctgatccgcaatctttacgcccgccgg
ggttcggacggcatcaatttctgttttgccggacacaccgacgtggtgccggtgggggcg
tcgggctggagcgtcgagcccttcgccggcaccatcttgaacaatcgcctgtacgggcgc
ggcgccaccgacatgaagggtgccatcgcctgtttcgtcgccgccgtttcgcgcttcgtc
gccaagggccagccggccggctccatcagcctgctgatcaccggcgacgaggaaggcccg
gcggtggacggcaccgtcaaggtgctggactggctgaaggtgcgcggcgaacgcctggat
atgtgtctggtgggcgagcccaccaatccgggccggctgggcgagatgatgaagatcggg
cgccggggctcgctcaattgccgtatcaccgtgttcggcacccagggccattccgcctat
ccgcatctggccgacaatcccatcccccggctgctggccatgctgaacgccctgaccgcc
gagccgttggaccacggctcgccgcattttcaggcctcgaccctggccttgaccacggtg
gatgtgggcaatgccgccaccaacgtcattccggcccaggcgcgggccggcttcaacatc
cgcttcaacgatctgcacagcggaaaatcgctggaacagtggatcaggcacaccttggac
agcgtcggcggcgattatgagtgcaagatcgaggtctcgggcgaaagctttctgaccgag
ccgggggtcttgtccgaggcggtggccgaatgcgcccgggcggtgaccggcctgacgccg
gaattgtcgaccacggggggcacctcggatgcccgcttcatcaagaatcattgcccggtg
ctggaattcgggctggtcagccagaccatgcacaaggtggatgaatacgtggccgtcgat
gacctggaggcgttgacgcaaatctatctgggcgtgctggaacgcttggtgggatcacag
tga
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