Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3654
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Entry
MGMSRv2__3654 CDS
T02960
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgy03016
]
MGMSRv2__3654 (truB)
Enzymes [BR:
mgy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MGMSRv2__3654 (truB)
Transfer RNA biogenesis [BR:
mgy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MGMSRv2__3654 (truB)
Prokaryotic type
MGMSRv2__3654 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CDL00869
UniProt:
V6F608
LinkDB
All DBs
Position
3741432..3742397
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AA seq
321 aa
AA seq
DB search
MARKRKGIAIDGWLAIDKPVGIGSTQVVSIVRRTLNAAKVGHGGTLDPLADGILPIALGE
ATKTVQWVMDGAKTYRCTIRFGQARSTDDLEGEVIATSDVRPSAQAIHDMLPRFTGDISQ
VPPIFSAIKVAGERAYDLARAGEQVDLKARVVSIHGLTVLGMADADHVELEVRCGKGTYI
RSLARDLAVALGSVGHITRLRRLACGPFTEQNAISLDKFTTVGQLPALRAYLLPIETALD
DIPALALTAAEARRLHSGQVLAIGQLADRDALPARPQNLTVRAMDGNRLVALACCDGTEV
RSLRVINLQPSHAGEDDVDYA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaagcgcaaaggcattgccatcgatggctggctggccatcgacaagccggtg
ggcatcggttcgacccaggtggtgtccatcgtccggcgcaccctgaacgcggccaaggtc
ggtcatggtggcacccttgatccgttggccgacggcatcctgcccatcgccctgggcgag
gcgaccaagacggtgcaatgggtgatggacggggccaagacctatcgctgcaccattcgc
ttcggtcaggcccgttccaccgacgatctggagggcgaggtcatcgccacctccgacgtg
cggccctcggcccaggccatccatgacatgctgccgcgcttcactggcgatatttcccag
gtgccgcccatcttttccgccatcaaggtggcgggcgaacgtgcctatgatctggcccgc
gccggtgaacaggtggacttgaaggcgcgggtggtcagcatccatggcctgaccgtgctg
ggcatggccgatgccgaccatgttgaactggaagtccgctgcggcaagggcacctatatc
cgttcactcgcccgcgatctggccgtcgccttggggtcggtcggccatatcacccggctg
cggcggctggcctgtggtccgttcaccgaacaaaacgcgatttccctggacaaattcacc
actgtggggcaacttcccgcccttcgggcatatctgcttccgatcgagaccgcgctggac
gacatcccggcgctggccctgacggcggcggaggcccggcgtctccacagcggtcaggtt
ctggccatcggccaattggctgaccgcgacgcactgcccgccaggccgcagaacctcacg
gttcgggccatggacggaaacaggctggtggcgctggcgtgctgcgacggcactgaagtc
cgatcgctgcgcgttatcaatctccaaccatctcatgcaggagaagacgatgtcgattac
gcctga
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integrated database retrieval system
