Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3850
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Entry
MGMSRv2__3850 CDS
T02960
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03420
Nucleotide excision repair
mgy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MGMSRv2__3850 (uvrD)
03430 Mismatch repair
MGMSRv2__3850 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__3850 (uvrD)
Enzymes [BR:
mgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MGMSRv2__3850 (uvrD)
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MGMSRv2__3850 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MGMSRv2__3850 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CDL01065
UniProt:
V6F6B2
LinkDB
All DBs
Position
complement(3943808..3946045)
Genome browser
AA seq
745 aa
AA seq
DB search
MTDPFALDDDIPDPFQPAPRRGGPAPVPADAPWLIGLNPEQHQAVTTTEGPVLVLSGAGT
GKTRVLTSRLAQILAGRRAQPWQILAVTFTNKAAREMKDRVAHMVGPVAEQLWLGTFHSL
CVRILRRHAEAVGLKSNFTILDADDQLRLLKQVMEAEHIDNKKWPAQSLMGAIQRWKDRG
LTPDKIGADLAGDLAGGRAGQLYRLYQERLLTLNAADFGDLLLHCLTLFLSHPDALAHYQ
EQFRYILVDEYQDTNVAQYLWLRLLAQKHKNICCVGDDDQSIYSWRGAEVGNILKFERDF
PGAAVVRLESNYRSTPHILAAASALIANNADRLGKTLRPGLKHEASEIEKVRVRGVWDGP
EEARVVIEEIETLQRRGESAASMAILVRAGFQTREFEERLITTGIPYRVIGGPRFYERQE
IRDALAYLRLINSPDDGLAFERIVNLPKRGLGDAALQAVHAVARARAFPLFEAARLLVET
DELKPKPRGALSKFCDDVLRWRSLLDDLPHPELAEMVLDESGYVEMWKNDKTPEAPGRVE
NLKELVRALSDYENLQSFLEHVALVMENDQRDGVDKVTIMTLHGAKGLEFDNIFLPGWEE
GVFPHQRAMDEGGNAGLEEERRLAYVGLTRARKRVLVTFAANRRIYNQWQSALPSRFLDE
LPAGHVEVQAERGLMGSWSQPAKPKGPGAWAIAPKERTSDFDVGERVFHQKFGGGTVLAV
DGDKLEINFDKAGTKKVLDSFVEPA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcccttcgcccttgacgacgacatccccgatccgttccagcccgccccccgt
cgcggcggtccggcgcccgtccccgccgatgccccctggctgatcggcctgaaccccgaa
cagcatcaggcggtgaccaccaccgaaggcccggtgctggtgctgtcgggggccggcacc
ggcaagacaagggtgctgaccagccggctggcgcagatcctggccgggcggcgggcgcag
ccgtggcagatcctggcggtgaccttcaccaacaaggcggcgcgtgagatgaaggaccgc
gtcgcccatatggtcggcccggtggctgaacaattatggctgggcaccttccactccctg
tgcgtgcgcatcctgcgccgccatgccgaggcggtggggctgaaatccaacttcaccatc
ctcgatgccgacgaccagttgcggctgttgaagcaggtgatggaagccgagcatatcgac
aacaagaaatggccggcgcaatcgctgatgggggcgatccaacgctggaaggatcgcggc
ctgaccccggacaagatcggcgccgatctggccggcgatctggccggcggccgcgccggg
cagctttatcgcctgtaccaggaacggctgctgaccctgaacgccgccgatttcggcgat
cttctgctgcattgcctgaccttgtttttatcccatcccgacgccctggcccattatcag
gagcagttccgctatatcctggtggacgagtaccaggacaccaacgtggcgcaatatctg
tggctgcggctgttggcgcaaaagcacaagaacatctgctgcgtcggcgacgacgaccaa
agcatctattcgtggcgcggggccgaggtcggcaacatcctgaaattcgagcgcgacttc
cccggcgcggcggtggtgcggctggaaagcaattaccgctccaccccccatatcctggcc
gccgccagcgccctgatcgccaacaatgccgaccgcctgggcaagaccctgcgccccggc
ctcaagcacgaggcgagcgagatcgaaaaggtccgcgtgcgcggtgtctgggacggcccg
gaagaagcccgcgtggtcatcgaggaaatcgagaccttgcagcgccggggcgaaagcgcc
gccagcatggccattttggtccgcgccggcttccagacccgcgagttcgaggaacgcctg
atcaccaccggcatcccctatcgggtcatcggcggcccacgcttttatgaacgccaggaa
atccgcgacgccctggcctatctgcggctgatcaactcgcccgatgacgggctggccttc
gagcgtatcgtcaatctgcccaagcgcggcttgggtgacgccgccctgcaagcggtgcac
gcggtggcccgggcccgagccttcccgctgttcgaggccgcccgcctgctggtggaaact
gacgaattgaagcccaagccgcgcggcgcgctctccaagttctgcgacgacgtgctgcgc
tggcgcagcctgctggacgatctgccgcaccctgaattggccgagatggtgctggacgaa
tccggctatgtggaaatgtggaagaacgacaaaaccccagaggcgccgggccgggtggaa
aacctgaaggaactggtgcgggcgctatccgattacgaaaacctgcaaagcttcctcgaa
cacgtggccctggtcatggaaaacgaccaacgggacggtgtcgacaaggtcaccatcatg
accctgcacggggccaaggggctggaattcgacaacatcttcctgcccggctgggaggaa
ggggtgttcccgcaccagcgcgccatggacgagggcggcaatgcgggattggaagaggaa
cgccgcctcgcctatgtcggtctgacccgagcgcgcaaacgggtgctggtcaccttcgcc
gccaatcgccgcatctacaaccagtggcaaagcgccctgcccagccgcttcctcgacgaa
ctgcccgctggtcacgtggaggtccaggccgaacgcggcctgatgggctcgtggtcgcag
ccggccaagccgaaggggccgggcgcctgggccatcgcccccaaggaacgcaccagcgat
ttcgacgtgggcgagcgggtattccaccagaaattcggcggcggcacggtgctggcggtg
gatggcgacaagctggagatcaatttcgacaaagccggcaccaagaaggtgctggacagt
ttcgtcgagccggcgtga
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