Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3878
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Entry
MGMSRv2__3878 CDS
T02960
Name
(GenBank) Inactivated superfamily I helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__3878
Enzymes [BR:
mgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MGMSRv2__3878
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MGMSRv2__3878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CDL01093
UniProt:
V6F8M4
LinkDB
All DBs
Position
complement(3973133..3976084)
Genome browser
AA seq
983 aa
AA seq
DB search
MSDAAAGSVFTIAPGLPFVDVLAGHLLRQAGGDPLRLAECVVLLPNRRACRALRDAFLRL
SGGQPLLLPRLKPIEPDQDDISDLDLLTPGGLDIPAAVPPIERHLILTRLVLQMGAGRGG
LPPSPDQAARLARELGELLDSVHIEEVPFDRLDTLAPDEYAAHWQITIDFLKIVTTHWPA
LLGGRIDHQQWVNRVLDAQGALWRADPPDHPVVAAGSTGSRPASARLLATIAGLPHGQVV
LPGLDLHMDAQSWEALDDSHPQFAHKHLLERLGLTRRQVLPLTPQPDPRAARSALLAEAL
RPAATCEAWRHLRDFPNALDGVALIDAPGPREEAGAIALALRQALETDTQTAALVTPDRD
LARRVAAELERWDIAIDDSAGRPLMLTEPGAFLRLLAEAVADGFPPHATLALCKHPLAAA
GLDPIRFRALTRRLETKEILRGPRPAPGLGGLRAACAGDARLIGWLDALESALAPFITLM
AAESAPLADLLRAHMEAAEALAADHANPGPARLWRGEAGEALARFAGDLAEALATIGAMF
TPLPPRFYPALFDELLSGRVVRPHWGRHPRLFIWGPMEARLQHADVMILAGLNEGTWPGK
AEADPWMSRPMRKAFGLPAPERRIGQSAHDFAQAFAAPRVLLSRSSRSEGAPTVPSRWLM
RLDAVMGARGLAFAHPQWEWLAWHALLDRAETRARIERPAPRPPIEARPRTVSVTEVETW
MRDPYGLYAKKVLKLKALPEIDADPGAADYGSLVHEAVEQFLLAYPGALPDDAEAKLLAV
GEAVFAQALERPGVWAFWWPRFRAVARWLATHEKKRRSELAAIHTEIKGSLEMEGPAGPF
LLHARADRVDVLKDGSLALIDYKTGQPPSPKEVAAGYAPQLPLEAAIAHFGGFDGIAPAA
VSQMLYWRLKGGAEGGEEKSAGADPKQLTDDALEGLYGLIAAFDDANTPYEARPHPDRAP
KYSDYLHLARVKEWAVAGEEEGE
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcggcagccggttcggtcttcaccatcgcccccggcctgcccttcgtcgat
gtgctggccggccacctgctgcgtcaggccggcggcgacccgctgcgtctggccgaatgc
gtggtgctgctgcccaaccgccgcgcctgccgggccttgcgcgacgccttcctgcgcctg
tcgggcggccaacccttgctgctgccgcgcctgaaacccatcgagcccgaccaggacgat
atttccgacctcgacctgctgacccccggcggcctggacatcccggcggcggtgccgccc
atcgagcgccacctgatcctgacccggctggtgttgcagatgggagcgggacgcggcggc
ctgccgcccagccccgatcaggcggcacggctggcgcgcgaattgggcgagctgctggac
agcgtccatatcgaggaagtgcccttcgaccgcctcgacaccctggcccccgacgaatac
gccgcccattggcagatcaccatcgactttctgaagatcgtcaccacccactggccggcg
ctgctgggtgggcgcatcgatcaccagcaatgggtcaaccgggtgctcgacgcccaaggg
gcgttgtggcgcgccgatccgcccgatcatccggtggtggcggcggggtccaccgggtcg
cgcccggccagcgcccgcttgctcgccaccatcgccggcctgccccacggccaggtggtg
ctgcccggcctggatttgcacatggatgcgcaatcgtgggaggccttggacgacagccac
ccgcaattcgcccataagcatttgctggaacgcctggggctgacccgccgtcaggtcttg
ccgctgacgccccagcccgacccgcgcgccgcccgttctgccctgctggccgaggcgctg
cgccccgccgccacctgcgaggcgtggcggcatctgcgcgacttccccaacgccctggac
ggtgtcgccctgatcgatgccccaggcccgcgcgaggaagccggggccatcgccctggcc
ctgcgtcaggcgctggagaccgacacccagaccgccgccctggtcacccccgaccgcgac
ctcgcccgccgcgtcgccgccgagttggaacgctgggacatcgccatcgacgattccgcc
ggcaggccgttgatgctgaccgagcccggcgccttcctgcgcctgctggccgaggcggtg
gccgacggcttccctccccatgccaccttggccttgtgcaagcatcccttggccgccgcc
gggctggaccccatccgtttccgcgccctgacccggcggctggaaaccaaggaaatcctg
cgcggtccccgccccgcccccggcctgggcggcctgcgcgccgcctgcgctggtgatgcc
cggctgatcggctggctggatgcgctggaaagcgccctggctccgttcatcaccctgatg
gccgccgaatccgcgcccttggccgatctgctgcgcgcccatatggaagccgccgaggcc
ctggccgccgaccatgccaatcccggcccggcccggctgtggcggggcgaggcgggggag
gccctggcccgcttcgccggcgatctggccgaggcgctggccaccatcggcgccatgttc
accccgctaccgccacgcttctacccggccttgttcgacgaattgctgtcgggccgggtg
gtccgcccccattggggccgccatccccgcctgttcatctggggaccgatggaagcgcgg
ctgcaacatgccgatgtgatgatcctggccggcctcaacgaagggacttggccgggcaag
gccgaggccgatccgtggatgagccggcccatgcgcaaggccttcggcctgccggcgccc
gagcggcggatcggccaatcggcccatgacttcgcccaggctttcgccgcgccgcgcgtg
ttgctgtcgcgttcgtcgcggtccgagggcgcccccaccgtgccgtcacgctggttgatg
cgactggatgcggtgatgggggcacgcggcttggcctttgcccatccgcaatgggaatgg
ctggcttggcacgccttgctcgaccgcgcagaaacccgcgcccgcatcgaacgcccggcg
cccaggccgcccatcgaggcgaggccgcgcaccgtctcggtcaccgaggtggagacctgg
atgcgcgacccctatggcctttacgccaagaaggtgctgaagctgaaggcactgccggag
atcgacgccgatcccggcgccgccgattacgggtcgttggtgcatgaagcggtcgagcaa
ttcctgctcgcttatcccggcgccttgcccgatgacgccgaggccaagctgttggcggtg
ggggaagccgtgttcgcccaggcgttggagcggcccggcgtatgggcgttctggtggccg
cgctttcgcgccgtcgcccgctggctggcgacgcatgaaaaaaagcgccgctccgaattg
gcggccattcacaccgagatcaagggctcgctcgagatggaaggccccgccggtcccttc
ctgctgcacgcccgcgccgaccgggtggatgtgctgaaggacggcagcttggccctgatc
gattacaagaccggccagccgcccagccccaaggaagtggccgccggctatgcgccgcaa
ttaccgctggaagcggccatcgcccacttcggcggcttcgacggcattgctccggctgcg
gtgtcacagatgctgtactggcggctgaagggcggggctgaaggcggcgaggagaaatca
gccggcgccgatcccaagcaactgactgacgacgcgctggaaggcctctacggcctgatc
gccgctttcgacgatgccaacaccccctatgaggcccgcccccatcccgaccgtgcgccg
aaatattccgactacctgcatctggcccgcgtcaaggaatgggcggtggccggggaagag
gaaggggagtga
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