Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3886
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Entry
MGMSRv2__3886 CDS
T02960
Symbol
priA
Name
(GenBank) Primosomal protein N' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MGMSRv2__3886 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__3886 (priA)
Enzymes [BR:
mgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MGMSRv2__3886 (priA)
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MGMSRv2__3886 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CDL01101
UniProt:
V6F8T7
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All DBs
Position
3980678..3982876
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AA seq
732 aa
AA seq
DB search
MVSVAANPSRQFSPHSRVAVLLPLPLAGLYDYLTGVESLQAGDFVAVPLGRREVIGVVWG
EATGGVAEAKLKPVIRRLSCPPLPAISRKFIDWVAGYTIAPPGAVLRMAMSVPQALEPVR
DLVACRAAVVLPEIKLTEARRRVLRVAGDLPPLLPADLAREAGVGPAVVKGLLEAGALEP
VPMAPPPPFASPDPDHPGPSLSPGQQAAADHLRQAVAGGFSVSVIDGVTGSGKTEVYFEA
IAAGLAAGRQSLVLLPEIALSAQWLERFRRRFGVEPAQWHSELSDAKRRDTWRAVAAGTA
KVVVGARSALFLPYKELGLLIVDEEHDAGFKQDDGVAYHARDMAVVRGQLGGCPVVLASA
TPSMETVANIASGRYTRLHLPDRHAGAALPTMDLIDLRRDPPPRGFWLSPLLVKAVEDTL
AAGEQAMLFLNRRGYAPLTLCRKCGHRLQCPHCTAWLVEHRGAGRMVCHHCGHHVRPPTK
CPQCEAEDSFAACGPGVERIAEEAAHRFPNARIGVMASDTVTGPQQAADFVRRVAEHEID
LLIGTQIVAKGYHFPLLTLVGVVDADLGLDGGDLRAGERTHQLLCQVAGRAGRAERPGRV
LLQTFQPAHPVMVALTSGGRDDFIEAEAEARRLAGMPPYGRLAALIVSGPEAGAVDDFAR
KLARAAPSLEGFQVIGPAPAPLALLRGRHRRRFLIKVRRDVALHGPLRAWLAAVPAPSAI
RVQVDVDPYGFL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgtcgccgccaaccccagccgtcaattttctccgcattcgcgcgtggcggtg
ctgctgcccctgcccttggccggactgtacgattatctgaccggggtggaaagcctgcag
gcgggggatttcgtcgccgtgcctttgggccggcgcgaagtgattggcgtggtgtggggc
gaggccaccggcggtgtcgccgaagccaagctgaagccggtgatccggcggctgtcctgc
ccgcccttgccggcgatcagccgtaaattcatcgattgggtggccggctataccatcgcg
ccgccgggcgcggtgctgcgcatggccatgagcgtgccccaggcgctggaaccggtgcgc
gatctggtcgcctgccgggcggcagtggtgctgcccgagatcaagttgaccgaggcgcgg
cggcgggtgttgcgggtggcgggcgatttgccgcccttgttgcccgccgatctggcgcgc
gaggccggggtcggccccgccgtggtcaagggattgctggaggccggcgccctggagccg
gtgcccatggcgccgccaccgcccttcgccagccccgatcccgatcatcccggtcccagc
ctgtcgccgggtcagcaggcggcggcggatcatctgcgtcaggcggtggcgggcggcttt
tccgtttccgtcattgacggcgtcaccggctcgggcaagaccgaggtttatttcgaggcc
atcgccgccggcctggccgccgggcggcaatccctggtgctgctgccggaaatcgccctg
tcggcgcagtggctggagcgcttccgccgccgtttcggcgtcgagccggcgcaatggcat
tccgaattgtccgatgccaagcgccgcgatacctggcgggcggtggcggcaggcacggcc
aaggtggtggtcggcgcccgctcggccttgttccttccttataaggagctgggactgctg
atcgtcgatgaagaacacgatgccggcttcaaacaggatgacggcgtcgcctatcatgcc
cgcgacatggcggtggtgcgtgggcaattgggcggttgtcctgtggtgctggcctcggcc
acgccgtccatggagaccgtggccaatatcgcctcgggccgctatacccgcctgcacctg
cccgaccgccatgccggagcggccttgccgacgatggacctgatcgatctgcgccgcgac
ccgccgccgcgtggcttctggctgtcgcccctgctggtcaaggcggtggaggacacgctg
gcggcgggggagcaggccatgctgttcctcaatcgccgcggctatgcccccctgacgctg
tgccgcaaatgcggccaccggctgcaatgcccccattgcaccgcttggctggtcgagcat
cggggggccgggcgcatggtctgccaccattgcggccaccatgtccgtccaccgaccaag
tgcccccaatgcgaggccgaggacagtttcgccgcctgcggtcccggcgtcgagcgcatc
gccgaggaagcggcgcatcgcttccccaatgcccgtatcggggtgatggcgtcggacacg
gtgaccggaccgcaacaggccgccgatttcgtccgccgggtggccgagcacgagatcgat
ctgttgatcggcacccagatcgtcgccaagggctatcacttccccttgttgaccctggtc
ggcgttgtcgatgccgatcttggtctggatggcggcgatctgcgcgccggcgaacgcacc
caccagttgctctgtcaggtggccgggcgcgccggtcgggccgagcgaccagggcgggtg
ctgttgcagaccttccaacctgcccatccggtgatggttgccctgacctcgggcgggcgc
gacgatttcatcgaggccgaggccgaggcgcggcgtctggccggcatgccgccctatggc
cgactggccgccctgatcgtttccgggcccgaagccggggcggtggatgatttcgcccgc
aagctggcccgggccgcaccaagtttagagggattccaggttatcggtccggctccggcg
ccgctggccttgttacgcgggcgtcatcgccgccgtttcctgatcaaggtgcggcgcgat
gtggccctgcacgggccgctcagggcttggctggcggcggtgccggcgcccagcgccatc
agggttcaggtggatgtcgacccctatggttttctctag
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