Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__4177
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Entry
MGMSRv2__4177 CDS
T02960
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy00521
Streptomycin biosynthesis
mgy00523
Polyketide sugar unit biosynthesis
mgy00541
Biosynthesis of various nucleotide sugars
mgy01100
Metabolic pathways
mgy01110
Biosynthesis of secondary metabolites
mgy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MGMSRv2__4177 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MGMSRv2__4177 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MGMSRv2__4177 (rfbC)
Enzymes [BR:
mgy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MGMSRv2__4177 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
CDL01392
UniProt:
V6F7Q9
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All DBs
Position
complement(4272068..4272565)
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AA seq
165 aa
AA seq
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MIVDKSEIDGVLTVTPGIFEDYRGYYVETYNQHDYQAAGIAVPFVQDDISVSRRGVLRGL
HGDAKTWKLISCLSGEIYLAVLDCRDCSPTKGAWQGFTISDRNRMQVLVPPGVANGHAIL
SERAIFHYKQSEYYDPGSQFTVKWNDPAHGIWWPLSDPILSQRDR
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgacaaaagcgaaatcgacggtgtccttaccgtcacccccggcatcttcgag
gattaccgcggctattacgtcgaaacctataaccagcatgactaccaggccgccggcatc
gccgtccctttcgtccaggacgacatttcggtgtcgcgccggggcgtgctgcgcgggctg
catggcgatgccaagacctggaagctgatttcctgcctgtccggagaaatctatctggcc
gtcctcgattgccgggactgctcgcccaccaagggggcgtggcagggcttcaccatcagc
gaccgcaaccgaatgcaagtgctggtaccgccgggggtggccaacggtcacgccattctg
agcgagcgggcgatctttcactacaagcagtcggaatattatgaccccggcagccagttc
accgtcaaatggaacgatccggcgcacggcatctggtggccgctatccgatccgatcctg
tcgcagcgcgaccgttga
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