Mycoplasma haemofelis Langford 1: HF1_14700
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Entry
HF1_14700 CDS
T01418
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mha
Mycoplasma haemofelis Langford 1
Pathway
mha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HF1_14700 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mha03021
]
HF1_14700 (rpoC)
03400 DNA repair and recombination proteins [BR:
mha03400
]
HF1_14700 (rpoC)
Enzymes [BR:
mha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HF1_14700 (rpoC)
Transcription machinery [BR:
mha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HF1_14700 (rpoC)
DNA repair and recombination proteins [BR:
mha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HF1_14700 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SAM_TNK
Motif
Other DBs
NCBI-ProteinID:
CBY93478
UniProt:
E8ZK07
LinkDB
All DBs
Position
complement(1062561..1066466)
Genome browser
AA seq
1301 aa
AA seq
DB search
MARRSSSAFKSQSSPNDFTIKALQISLASPEYVRSLSKGEVTSFETINYKSLRPEKGGLF
CESIFGPIKDYECSCGKYKQVKYKGKKCEKCKVYITQSLVRRDWMGHIELACPVAHIWMI
KELPLPAKISLILGIKYKHVEEVVYFVNYIVLDPGHLQVEGKTLFDPLEIIDVSNSKSSI
ASLAKLRTLLRTIYETIQKENPESYLTDLNYQQGRAYYKALSNSNLPFSIMDMFEYIEKH
TGLKVGIGAEAIYELLKKVDLESLEYKLTQELNVNFPSGLNYADPKVRKILSRLQVIRWF
KESKNRPEWMILKVIPVIPPNLRPIIQLSGGRFTSSDINTFYRRIIVRNDRLARILNLNV
AHIISNNEKRMLQEAVDSLIDNSSRKKPLTARDRHPLKSITDHLKGKQGLFRQNLLGKRV
DYSGRSVIVVGSELKMYQVGLPILMILSLFKPFIIRDLIRKVDDNGVECVPIAANIKTAS
KMIMEQSDEIWPVVHKVIKERPVLLNRAPTLHRLSIQAFEPILVEGKAICLHPLVTTAFN
ADFDGDQMAVHLPLSAEAVHEARSMLLAPWQILGPKDGKPIVTPSQDMVLGIYHLTTEDK
EAIGSGSLFATPDEVVHAYQLGKVDLSSIIAIGTSGFPKKRFPKSGILITTVGKIIFNSR
LPEDYKFINQSEGMWVSENDILDYGVSRLDYINAYQEKEPFAKSVIGRLIEDLYDNYSCQ
DLAPVLDSIKDMGFEYSTKSCTTISAFDVPKFSDKQSLLEEADKLVEQQKSFFRKGLVTD
DEKYKNVIAIWSSVKDKVSDHIKNALKSKEFQSNPIVIMARSGARGNVSNFIQLSGMRGL
MNKSYNYDQNTNTKVVRDIIEVPIKHSFIEGLTVIEYFNSSYGARKGMTDTAMKTAKSGY
TTRKLVDAAQEVIVKVEDCGSNKGLIVEELRDKEHSMPIKTLKDRIVFKCAHIDILHPET
GEVIVGANEVITKEAADKIVAAGITKVQVRSVLHCRLKQGICQKCFGYDLTTKQMIDVGT
TIGVIAAQSIGEPAVQLTMRTFHSGGVAGESNISQGFERLRQLFEIVAPKKWETSVISEI
TGTVENIEIRDDERVVTVSSDINRREYNCDLNLPILVKKGQKINFGDRICDGSVDLKKLL
EVSGVEAVRQYIVQEIWKVYWIQGIDVSEKYIEIIVRQLTSRLKVLSPNDSKWAMGEVVD
YSSFVDECAKLLLDGKTPPIATSIIFGLEEVPEKTNSFLAAASFQDTKKILTDACVRGQI
DYLNSLKENIMVGNLIPAGTGLKSADEVISDERSNRNVFNY
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaggagttctagtgcttttaaatcacaaagcagtcctaatgatttcaccatt
aaggctttacagatctctttagcttctccggagtacgtaagatctctatctaagggtgaa
gttacttcttttgaaaccattaactataagtctctaaggccagagaagggagggttattc
tgtgaaagtatttttgggcctatcaaggattacgagtgttcttgtggtaaatataagcag
gtaaagtacaagggtaagaaatgtgagaagtgtaaggtatacatcacccagtccttagtg
cgtcgtgactggatgggtcacatagaattggcttgtccggttgctcacatctggatgata
aaggagcttcctcttcctgccaaaatctctcttatattaggtattaagtacaagcacgta
gaagaggttgtttactttgtaaactacatagttttagatccggggcatcttcaagtagaa
ggtaagactttatttgatccccttgaaatcatagatgtttccaactccaagagttctatc
gcttcacttgctaaattaagaactcttcttagaactatatacgagactattcagaaggag
aatccggagtcctacttaactgacttaaattaccaacaaggtagagcatattataaagcc
ctttctaactcaaacttgccattctccatcatggacatgtttgagtatattgagaagcac
acagggcttaaagttgggataggtgcggaagcaatttacgaacttcttaagaaggttgat
cttgaaagtttggaatataaattgactcaggagcttaatgtaaacttccctagtggtctg
aattatgcagatcctaaggttagaaagattctttcaagacttcaggttattagatggttc
aaggaatccaagaatagaccagagtggatgatcttaaaggttatccccgttatacctcct
aatcttcgtcctattattcaactttccggtggtagatttacgtcttctgatatcaacacc
ttttatagaagaattattgttagaaatgacaggcttgccagaattctgaaccttaatgtt
gcgcatatcatctccaataatgaaaagagaatgttgcaagaggctgtggactccttgatt
gataactccagtagaaagaaacctttaactgctagggatagacatcctcttaaatctatt
acagatcatcttaaaggtaagcaaggtctcttccgtcaaaaccttttaggtaagagggtt
gactattccggtcgttctgttattgttgtagggtctgaactgaaaatgtatcaggtaggg
ttgcctatcctgatgattctgtctctatttaagccatttattattagggacttaattaga
aaggttgatgacaatggagttgaatgtgttcctattgcagccaatattaagaccgcttct
aagatgattatggagcagtctgatgaaatctgaccagttgttcacaaggttataaaagaa
aggccagttcttctaaaccgtgctcctactcttcaccgtttaagtattcaagcttttgag
cctatccttgttgaaggtaaggctatttgcttacaccctcttgttacaaccgcctttaac
gctgacttcgacggtgaccaaatggctgttcacttacctctgtctgctgaagctgttcat
gaggctagatctatgttattggctccttgacaaattcttggccctaaggatggtaagcct
attgttactccatcccaagatatggtgttgggtatctatcacttaactactgaggacaag
gaagctattggttctgggtctttatttgcaactcccgatgaagttgttcatgcttaccaa
ctaggtaaagttgatctgtcttctattattgcgattgggacttctggttttcctaagaag
agatttccaaaatcaggtatcttgatcaccactgtagggaagatcatattcaacagtagg
cttccagaggattacaagtttattaatcaaagtgaagggatgtgggtgtcagagaatgac
atcttggattacggagtaagtaggttggattacattaatgcttatcaagagaaggagcca
ttcgcaaaatctgttattggtagattgatagaggatctttatgacaactattcttgtcaa
gatttagctccggttctggactccattaaagatatggggtttgagtattccaccaagtcc
tgtacaactatttccgctttcgatgttcctaagttctccgataagcaatcccttctagaa
gaggctgataagttagttgagcaacagaaatccttctttaggaagggtcttgttactgac
gatgagaaatataagaacgttattgccatttggtcttccgttaaggacaaggtttctgat
cacattaagaatgctcttaaatctaaggaatttcaaagcaaccctattgttatcatggcc
agatctggtgctaggggtaatgtatctaactttattcagctatccggaatgaggggtctg
atgaacaaatcctataactatgaccagaatacaaataccaaggtagttagagatattatt
gaggttcctattaagcactccttcattgaagggcttacagttattgaatactttaactcc
tcctatggtgccagaaaaggtatgaccgataccgccatgaaaacagctaaatctggttat
acaactaggaagttggtggatgctgctcaagaggttattgttaaggttgaggactgtgga
tccaataagggattgattgttgaagagcttagagataaggagcattcaatgccgattaag
acccttaaagatagaatcgtatttaaatgcgctcatattgatattcttcaccctgaaacc
ggagaagttattgttggtgcaaatgaggtaattactaaggaagctgcagacaagatagtg
gccgctgggattactaaggtacaggttagatccgttcttcactgtagattgaaacagggt
atttgtcaaaaatgctttggttacgacttgaccacaaaacaaatgattgatgtgggaact
actatcggtgttatcgcggctcaatccatcggtgagccagctgttcagttgaccatgaga
acgttccactccggtggggttgctggtgaatctaatatttcccaaggttttgaaagattg
agacaactatttgaaatagtggctcctaaaaaatgggagacttctgtgatctctgaaatt
actggtacagttgagaatatagaaattagggatgatgagagggttgttactgtttcaagt
gatatcaacagaagggagtacaactgtgatttgaacctaccgatattagttaagaaaggg
cagaagattaatttcggtgacagaatatgtgatggatctgtagatcttaaaaagctgtta
gaagtttctggtgttgaggctgtaaggcaatatatagttcaagagatttggaaggtttat
tggattcaaggtatcgatgtttccgagaagtatattgagatcatagtaagacaattgaca
tctaggcttaaagtgctttctccgaatgattccaaatgagctatgggtgaggttgtagac
tactcttcctttgttgatgaatgtgctaaattgcttctggatgggaaaacccctcctatt
gccacaagcatcatcttcggtcttgaggaggtgcctgaaaagacaaactccttcttggct
gccgcttctttccaagataccaagaagatcttgacagatgcttgtgttagaggtcagatt
gattacttgaattccttgaaagagaatatcatggttggtaacttgattcctgctggaaca
ggacttaaatctgctgatgaagttatttctgatgagagatctaatagaaatgtctttaat
tattag
DBGET
integrated database retrieval system
