Mycoplasma haemofelis Langford 1: HF1_14840
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Entry
HF1_14840 CDS
T01418
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mha
Mycoplasma haemofelis Langford 1
Pathway
mha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF1_14840 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mha03019
]
HF1_14840 (rnr)
03016 Transfer RNA biogenesis [BR:
mha03016
]
HF1_14840 (rnr)
Enzymes [BR:
mha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HF1_14840 (rnr)
Messenger RNA biogenesis [BR:
mha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HF1_14840 (rnr)
Transfer RNA biogenesis [BR:
mha03016
]
Prokaryotic type
tRNA degradation factors
HF1_14840 (rnr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
RNase_II_C_S1
OB_RNB
DUF3097_N
Motif
Other DBs
NCBI-ProteinID:
CBY93492
UniProt:
E8ZK21
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All DBs
Position
1083055..1084974
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AA seq
639 aa
AA seq
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MTTHNSKFKGKAKPRWLFEEVEGSKTEGIFKSHGHYGFIEGTDLFVRGENINTALNKDKV
EYVVIKNTGFVEEGKSRFEAKILSVLERYKTSYVGEVIYCGKDQSFILLDSERLKRVASF
TPETDDYKIGEKVIIQLTSFDLENLQGKVIKRIGHKSDPNMEIISILEDYGVKTSFPEEV
IEEVQNVNLDIERHESHPARKDFRDIRLVTIDPSDSKDFDDAIAVYKKGDNYLLYVAISD
VWSYLKDARNTDVEARRRGTSIYFLDSVIPMLPEKLSNNYCSLMPHQDRCAIVFSIEIDG
KGKVLWDTMDVNPGIIHSKRRFTYGEVNEFFDGENQLEREDLEVRESLTLGLELYKMLEN
NRINRGYIAMEFPELKMKMSPSGEITEIYPYIRKHAQIMIENFMILANEGIARLLSEKNI
PGIYRVHENPDVTKILFFVEEARKLSFEIEDTNFEKITQKTISSWFRNTSSHENMDLIYL
LLLRSLQKAKYSINNAGHFGLNLKHYLHFTSPIRRYPDTMVHKMLWNYLFEKNEIPKNGG
DPIYCDLHDIAKDSSHAEVQSNEISKEIKNCKIIQFMNKKVDSTFKAKVVFPAKSGAYVQ
LEDYYVEGFVKSRVPLILGSNVLVKPIHNSKEFKLLKVL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacacacaatagcaaatttaaaggaaaggcgaaacctcgttggctattcgaagaa
gtagagggtagtaagactgaggggatatttaaatcccatggtcattacggattcatagag
ggtactgatttatttgtaaggggagagaatataaataccgctttaaataaggacaaagtt
gaatacgtagtaatcaagaatacgggctttgtagaagaagggaagagtaggtttgaagct
aagattctctctgtattagagaggtataagaccagctatgtaggggaagttatatattgt
ggtaaagatcagtccttcattcttctagattctgaaagattaaagagagtagcatccttc
actcccgagacggatgattacaagattggggagaaggtaataattcaacttacatccttt
gatctagagaatctacagggtaaggtaattaagagaattgggcacaagagtgatcccaat
atggagatcatctccatacttgaagattacggagttaagacttccttcccagaagaagtt
attgaagaggttcaaaatgtcaatctggatatagaaagacatgagtctcatcccgccaga
aaggacttcagagatataaggttagtaactatagatccttcagattccaaggactttgat
gatgcaatagccgtatacaagaagggagataattatctcctgtatgtggccatatccgat
gtttggagttacttaaaggatgctagaaatacagatgtagaggcgagaagaagagggacg
tccatatatttcttggattcagtaatccccatgcttccggaaaagctgtctaacaactac
tgctcactaatgccccatcaagacagatgtgcaattgtattctccatagagatcgatggg
aaggggaaagtattatgggatactatggatgtaaatccggggattattcactccaagaga
agatttacctatggagaagtaaatgagtttttcgatggcgagaatcaattggagagggag
gatctggaagtgagggagtccctgactcttgggttggagctctacaagatgttagagaat
aataggatcaatagaggatacatagccatggagtttccggaattaaaaatgaagatgagt
ccttcgggtgaaattaccgagatatatccctacattaggaagcatgcccagataatgatt
gagaactttatgattttggcgaatgagggaattgcgaggttgctgtctgagaagaatatt
cctgggatttatagagttcatgagaatccggatgtgaccaagatactcttcttcgtcgag
gaggcaagaaagcttagctttgaaatagaagataccaactttgaaaagataactcagaag
accatttcctcttgattccggaatacttcctctcacgagaatatggatctaatatatctc
ctacttcttagatccctacaaaaagctaagtactcaattaataatgctgggcattttgga
ttaaatctgaagcactatctacactttacttcccccataagaagatacccggataccatg
gttcacaagatgctatggaactatctatttgagaagaatgagattcctaagaatgggggc
gatcctatttattgtgatttgcatgatattgccaaggactcctcccacgcggaagttcaa
agtaatgagataagtaaggaaattaagaattgcaagataattcaattcatgaataagaag
gtagactccaccttcaaagctaaagttgtattccctgcaaagagtggagcttatgttcag
ctggaggactactacgtagagggattcgtcaaaagtagagttcccttaatactaggatcc
aatgtcctagtaaaacctattcataactccaaggaatttaaacttctaaaagttctttaa
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