Marivirga harenae: Q3Y49_09275
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Entry
Q3Y49_09275 CDS
T09240
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mhaa
Marivirga harenae
Pathway
mhaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q3Y49_09275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhaa03021
]
Q3Y49_09275
03400 DNA repair and recombination proteins [BR:
mhaa03400
]
Q3Y49_09275
Enzymes [BR:
mhaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q3Y49_09275
Transcription machinery [BR:
mhaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q3Y49_09275
DNA repair and recombination proteins [BR:
mhaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q3Y49_09275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WKV14016
LinkDB
All DBs
Position
2141682..2142671
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVAMEKADDFHGLFTFKPLEKGYGVTVGNALRRILLSSLEGYAITGIKIP
GVLHEFSSVEGVVEDVSEVILNLKMVRFKKIADVADNKINISLKNIKEFKAGDINKFTTA
YEILNPELLICHMDESVNFEIELTIEKGRGYVSSEDNKVMDQATDYIAIDSIFTPIKNVK
YSVENTRVEQKTDYEQLVLDIETDGSIHPEVALKGAANILIKHFMLFSDQNMVLDAGGSD
EPEAVDEEMLHMRKLLKTALNDLDLSVRAYNCLKAADVKTLGDLVALEISDMMKFRNFGK
KSLAELEQLVADKGLTFGMDLSKYKLDEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtccattttagcattccaaatgcctgaaaaggttgcaatggaaaaagcagatgatttt
cacgggctttttacatttaaaccgttagaaaaaggatatggtgttactgtaggtaatgcc
ttaagaagaattttgttgtcttcacttgaaggttatgctataacagggatcaaaattcct
ggtgtattgcatgagttttcttcagtggaaggtgttgttgaggatgtgtctgaagttatc
ttaaacctgaaaatggtgagatttaagaagatagcggatgttgctgacaacaagatcaat
atttctcttaagaatattaaggaattcaaggcaggtgacattaataaattcactacagct
tatgagatcttaaaccctgagttgttgatttgtcatatggatgaatcagtaaattttgag
atagaattgactatcgagaagggcaggggatatgtttcttctgaggataataaggtaatg
gatcaagctacggattatatcgctatcgattcaattttcactcctatcaaaaacgtaaaa
tatagcgttgaaaatactagggttgaacaaaagactgattatgaacaattagtcttagat
attgagacagatggtagtattcatccagaagttgctttaaaaggagcagcaaacattttg
attaagcactttatgctattctctgaccaaaatatggtattggatgcaggcggatctgat
gagccggaagctgtagatgaggaaatgttgcatatgcgcaaattgctaaaaacggctctt
aatgatttagatctttctgttagggcatataattgcttaaaggcagcggatgtaaaaaca
ttaggtgatctagtagcacttgagatttctgacatgatgaaattcagaaatttcgggaag
aaatctttagcagaattagagcagttggtagctgataaagggttaacctttggaatggat
ttatccaaatacaaacttgacgaagaataa
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