Marivirga harenae: Q3Y49_09760
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Entry
Q3Y49_09760 CDS
T09240
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhaa
Marivirga harenae
Pathway
mhaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q3Y49_09760 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhaa03019
]
Q3Y49_09760 (recQ)
03400 DNA repair and recombination proteins [BR:
mhaa03400
]
Q3Y49_09760 (recQ)
Enzymes [BR:
mhaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q3Y49_09760 (recQ)
Messenger RNA biogenesis [BR:
mhaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q3Y49_09760 (recQ)
DNA repair and recombination proteins [BR:
mhaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q3Y49_09760 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ-1-like_HTH
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
WKV10499
LinkDB
All DBs
Position
complement(2264413..2266590)
Genome browser
AA seq
725 aa
AA seq
DB search
MIEEQEATLKEKLKEIFGYNQFRGNQELIMQNLINGKNTFVIMPTGAGKSLCYQLPAISQ
EGTALVVSPLIALMKNQVDTLVALGVNAAFLNSTLTKTEIKRVKKEVMNGDLKLLYVAPE
SLTKEENVEFLKQANISFAAIDEAHCISEWGHDFRPEYRKIKAILQQISNIPIIALTATA
TPKVQLDIQKNLNMEEANVFKSSFNRENLYYEVRPKNQAKKQLIRFLNDRKGKCGVIYCL
SRKKVEEIAEFLNVNGFNAAPYHAGLESATRMKNQDDFLNEDVDIIVATIAFGMGIDKPD
VRFVIHYDTPKSVEGYYQETGRAGRDGLVGDCLMFYSYNDILKLEKFNKDKPVTEKENAK
LLLEEMSSYAESSVCRRKQLLHYFGEEFSDYCGKCDNCIHPKEKFEAKEEMTTVLKTVKL
TKQRFGINHLVNVIRGSKDQYVSSYDHDKLDVHGVGADQDPEFWKSVIRQTMLYGYLSKD
IENIGVLKINKAGEDFLKNPTDVQFTVNHVYTDDGDEDQIEKESVSAKAFDETLYAQLKA
LRKKVAKSKNLPPYVIFQDPSLEEMATTYPTTNEEMAAVNGVGLGKVRKFGKPFMDLIKE
YVDENDIITAADVMVKSSVNKSKMKIFIIQQVDKKIDLEEIAEMKDISFEELIDEIEHIC
YSGTTLNLNYYLNQIIDDEKQEEIMDYFLSAESDSIDEALDEFEDEFSEEDLRLMRIKFL
STYAN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagagcaagaagctactttaaaagaaaaattaaaagagatatttggatacaat
caattcaggggaaatcaggaattgataatgcaaaatctaataaatggtaaaaacactttt
gtgattatgccaactggagcagggaaatctctctgttaccaactacctgctatttcccaa
gagggaaccgccttagtagtatcgccactaattgcattaatgaaaaatcaggtagacacc
ttagtcgcattaggggtaaatgctgcctttctaaattccacccttaccaagacagaaata
aagagggtgaagaaagaagtgatgaacggagacttaaaacttctttatgttgctcctgaa
tctttaactaaagaggaaaatgttgaatttctaaagcaagctaacatctcttttgctgcc
attgatgaggcacactgtatttctgaatggggccatgactttaggccagaatacagaaaa
ataaaggcaatcttacagcaaatatcaaatatcccaataattgctctgacggcaacggcc
actccaaaagtacaacttgatattcaaaaaaacttgaatatggaagaggccaatgtattt
aagtcctcttttaacagggaaaacctctattacgaagtgaggcctaagaatcaggccaaa
aagcagttaatccgttttcttaacgatcggaaaggcaaatgcggggttatttattgctta
agcagaaaaaaagtggaagaaattgcagaattcctgaatgttaacgggtttaatgctgct
ccttatcatgctggtttagaaagtgctacccgtatgaaaaaccaagatgatttcttgaat
gaagatgtagatatcattgtggctactattgctttcggtatgggcattgataaaccggat
gttcgctttgtgattcattacgacactccaaaatctgtagaaggatactatcaggaaacg
ggaagggcaggccgagatggattagtcggtgattgcttaatgttctacagctacaacgat
attcttaaacttgaaaaatttaataaggataagcctgtaacagaaaaagaaaatgccaaa
ctcttgttggaagagatgtcttcctatgcagagtcatctgtatgcagacggaaacaacta
ctgcattactttggagaggaatttagtgactattgtggtaaatgtgataactgtatacac
ccgaaggaaaaatttgaagcaaaagaggaaatgactactgttttaaaaacagtaaaatta
accaagcaaagatttggtatcaatcatttagtaaatgtaatcagaggttctaaagatcaa
tatgtaagtagttacgatcatgacaaattggacgtacacggagttggtgctgatcaagat
cctgaattctggaagtcggtaattcggcaaacaatgctgtatggatatttatccaaagac
atcgaaaatattggggtattgaaaataaataaagcaggagaagacttcttaaagaaccca
actgatgttcaatttacagttaatcatgtttatactgatgatggcgatgaagatcaaatt
gaaaaagaatcagtttcggctaaggcctttgatgaaacactctacgctcaattaaaagcg
cttagaaaaaaagtcgctaaatcaaaaaatcttccaccatatgtgatcttccaagatccg
tctttagaggaaatggctaccacttaccccactaccaatgaggaaatggcagccgtaaat
ggcgttggtctaggaaaagttcggaagttcggaaaaccgtttatggacttgattaaggaa
tatgttgatgaaaatgatattatcacagctgcggatgttatggtaaaatcatctgtcaac
aaatccaaaatgaagattttcatcattcagcaagtcgataaaaaaattgacttggaggaa
atagctgaaatgaaggatatttcttttgaagaactgattgatgaaattgaacatatttgt
tattctggaaccactttgaacttaaattattacttaaatcagataatcgatgatgaaaag
caagaggaaattatggactattttctttctgcagaatctgacagtattgatgaagcattg
gatgaatttgaagatgaattcagtgaagaagatttaaggctcatgcgtattaagttttta
tctacttatgccaactaa
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