Marivirga harenae: Q3Y49_09810
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Entry
Q3Y49_09810 CDS
T09240
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhaa
Marivirga harenae
Pathway
mhaa03030
DNA replication
mhaa03430
Mismatch repair
mhaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q3Y49_09810 (dnaE)
03430 Mismatch repair
Q3Y49_09810 (dnaE)
03440 Homologous recombination
Q3Y49_09810 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhaa03032
]
Q3Y49_09810 (dnaE)
03400 DNA repair and recombination proteins [BR:
mhaa03400
]
Q3Y49_09810 (dnaE)
Enzymes [BR:
mhaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q3Y49_09810 (dnaE)
DNA replication proteins [BR:
mhaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q3Y49_09810 (dnaE)
DNA repair and recombination proteins [BR:
mhaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q3Y49_09810 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
MCM10_OB
T2SSK
DUF6282
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
WKV10507
LinkDB
All DBs
Position
2277865..2282166
Genome browser
AA seq
1433 aa
AA seq
DB search
MYLIYDTETTGLPKNYNAPLSDADNWPRCVQIAWQLHGANGELLDAQNHIIYPEGYDIPY
NAEKVHGISTERAQKEGKPLVEVLEAFKTVLEKTDVVVGHNISFDVSIMGAEMLRKELSV
EVLTEKPIIDTKDEGTDFCKIPGGRGGRYKWPTLTELHKKLFGQDFADAHDAAYDVDATA
KCFFGLISENVVKPLGDTSIEAIQYEPPKLDVANFASSSKSEEKAAADALKQAKNADISE
LSDTSFVHLHCHTQFSILQSTTEIPSMVNKAKELGMPAIAMTDHGNMMGAYNFVRDANKA
GVKPIVGCEYFLTQDRNNKKNKDDGFQTVLLAKNKAGYHNLAKLSSIAFVEGFYYVPRID
REALVQYKENIIATTGGLWGEVPFLILNAGESQAEEAFLWWKEQFGDDFYIELNQHGVPE
EQKVNEVLLKFAEKHNVKYFAANNTYYTNKEDAEAQDILLCVKDGETTGEQGKPKKYVGK
RGREYRFGLPNDEFYIKSPDEMKKLFADYPEAITCTAEIAEKIEGFELARDVLLPKYDIP
QEFIDPKDAEDGGNRGENAYLKHITFEGAKKRYPEITSEIQERLDFELETIERTGYPGYF
LIVQDFTTAAREMGVSVGPGRGSAAGSAVAYCTGITNIDPVKYDLLFERFLNPDRVSLPD
IDIDFDDHGRQKVIDYVIEKYGANQVAQITTYGTMAAKSAIRDTARVMELPLMDADRIAK
LVPDIKLKALFDLAPDKKKLSAKLKNNGEAISKAEELLNLAKANDASAKVINQARVLEGS
VRNTGIHACGVIITPDDITKFVPVALAKDSDMYCTQFDNAVVENAGLLKMDFLGLKTLTL
IKDAVRIVEERHGVKLDPDEFPIDDEKTYELFQKGETVGIFQYESPGMQKYLRELKPTEF
SDLIAMNALYRPGPLEYIPNFVKRKNGLEEISYDLDEMEEYLKETYGITVYQEQVMLLSQ
KLAGFTKGEADVLRKAMGKKIFALLEELKPKFINQGAEKGHPKDVLEKIWKDWEAFAAYA
FNKSHSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMGQITDVTFFMEECKRAGIEVLGPD
VNESNPGFTVNENGQIRFGLAAIKGAGSAAVESIIEERKSSGQYKDIFDFAERIPLKSVN
KKTFESLAMAGGFDCFKEYHRKQFLTSDNGEGTLIEKIIKYAQKLQHEKDSAQTSLFGGE
GGVAIPPPRVAEMEPYSELEKLNIEKEVVGLFISGHPLDEYRFEMESFCNTQVSELNDLD
SLASKNEVKVGGIVTSIAHRQTKTGKPFGTLTLEDYGGSFTFFMFGDDYLANKQFYENGW
FIFISGRVGKKPWGDQALEFKISKVELLSELRDKRTKSLAIMLDLNAITEDLIVELDNLC
QTFRGECEVKLELQDKVNGYKVETKSRKYKVNPSNELIEGLNRIPDLSYRILT
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttacgataccgagaccaccggattaccaaaaaattataatgcaccctta
agtgatgcagacaattggcctcgctgcgtccagattgcatggcaattacacggagccaac
ggtgagcttttagatgctcaaaatcatatcatttatccagaagggtacgacattccttat
aatgcggagaaagtacatggcatttctacagagagagctcaaaaagaaggtaagccgctc
gttgaagttttagaagctttcaaaactgttttagagaaaacggatgttgtggttggtcat
aatatcagctttgacgtttccataatgggagcagaaatgctgagaaaagagctttcagtt
gaggtcttgactgaaaaacccatcatcgatactaaagatgaagggactgatttctgtaag
attcctggcggtcgaggtggaaggtataaatggccaaccttgaccgaattgcacaagaag
ctttttggtcaagattttgccgatgcgcacgatgctgcttatgatgtagatgccaccgct
aagtgtttctttggattgatatcggaaaatgtagtcaagcctttgggcgatacttcgatt
gaagccattcaatatgagcccccaaaactggatgttgcaaattttgcaagcagttcaaag
tcagaagaaaaggcagcggcagatgctttaaagcaagctaaaaatgctgatatatcagaa
ttgtctgatacttcatttgttcaccttcattgccatacacagttttcaattctgcagtcc
accacagaaattccatcaatggtcaataaggctaaggaattggggatgccagctatcgct
atgacagaccatggcaatatgatgggtgcttataatttcgtaagagatgcaaataaagca
ggggtgaagccaattgtaggctgtgagtattttttaacgcaggatagaaacaataaaaag
aacaaggatgacgggttccagaccgtacttttggcgaaaaataaggctggctaccataac
ttagccaagctttcatccatcgcttttgtggagggattttattatgtaccgaggattgat
agagaagctttagtacaatacaaagaaaatattatcgccactactggtggattatgggga
gaagttcctttcttaatattaaatgcgggagaaagccaagctgaagaagcatttttatgg
tggaaggaacagtttggagatgatttttatatagagttaaatcagcatggagttcctgag
gaacaaaaggtaaatgaagttttattaaaatttgctgaaaagcataatgtaaaatatttt
gcagcaaataatacctattacaccaacaaggaggatgccgaagctcaggatattttactt
tgtgtaaaagacggagaaaccactggtgagcaagggaagccgaagaaatatgtagggaaa
agagggagagaatatcgttttggtttgccaaatgatgaattctatatcaaatctcctgat
gaaatgaagaagctttttgctgactatcctgaagccattacttgtacagcagaaattgca
gagaaaattgaaggttttgaactagcaagggatgtcctattaccaaaatatgatatcccc
caagaatttatagatccaaaagatgcagaggatggaggtaatagaggagaaaatgcctat
ttgaaacatattacctttgaaggtgccaaaaagcgttatcctgaaattacctctgaaatt
caagagaggctagatttcgaattagaaaccatcgaaagaactggttatccgggatacttc
ttaattgtacaagatttcaccactgcagctagagaaatgggcgtttctgtaggaccgggt
aggggttcagctgctggctcagctgtggcctattgcacaggaatcaccaacattgatcca
gttaaatacgatctgctttttgagcgttttttgaatccagatagggtttcattgcctgat
attgatattgactttgatgatcacggacggcaaaaagttatagattatgtaattgagaaa
tatggagctaatcaagtggctcagatcaccacatatggaacaatggccgctaaatctgca
attcgagatacagccagagttatggaattgcctttaatggatgctgatagaatagccaaa
ttagttcctgatatcaaattaaaagcacttttcgatttagctcctgataaaaagaaattg
tcagccaagttgaaaaataatggagaagctattagtaaggccgaagaattattgaatttg
gctaaagcgaatgatgcctctgcaaaagtaatcaatcaagctagggttttggaaggctcc
gttagaaacacgggtattcatgcctgtggggttataatcacacctgatgatattaccaaa
tttgttccagttgccttggcaaaagattcggatatgtactgcacgcaatttgataatgcg
gtggtggaaaatgcaggccttctgaagatggatttcttaggcttgaaaacccttacgcta
atcaaagatgcggtaagaattgtagaggaaagacatggagttaagcttgatccagatgaa
ttcccgatagatgatgaaaaaacttatgaattattccaaaaaggtgaaacggttggtatt
ttccaatacgaatcacctggaatgcagaaatatttaagagaattaaagccgactgaattt
tcggatttaattgctatgaatgctctctatcgcccgggaccactagagtatattccaaat
ttcgtaaaacgtaaaaatggtttagaagaaatcagctacgatcttgatgagatggaagaa
taccttaaggaaacttatggtattaccgtttatcaagagcaagtaatgcttttatcgcag
aaactggcaggctttacgaaaggtgaggccgatgttttacgtaaggcaatgggtaagaag
atttttgctttgctggaagaattaaagcccaaatttattaatcagggtgctgaaaaaggt
catccaaaagatgtgttggagaagatttggaaagattgggaggcttttgctgcttacgcc
tttaataaatcacactctacgtgctatgcttgggtagcttatcaaacagcgtatttgaaa
gcacactatccagctgaatacatggcttctgtattgagcaataatatggggcaaatcacg
gatgtcactttctttatggaagaatgtaaacgtgcagggatagaagttttggggccagat
gtgaatgaatctaatcccggatttacagtaaatgagaacggtcaaattcgatttggtttg
gccgctataaaaggagctggttcagccgctgtggaaagcataattgaagaacgaaagtca
agcgggcaatacaaagacatctttgattttgcagagcgaattccattgaaaagtgtcaat
aaaaagacatttgaatcattggctatggctggaggatttgattgctttaaggagtatcat
agaaagcaattcttgacttctgataacggagaagggactttgattgaaaaaatcattaaa
tacgctcaaaaattgcagcatgaaaaggacagcgcacagacctctttgtttggtggagag
ggcggagtagctattccaccaccaagagttgcggaaatggaaccctattcggaattagag
aagcttaatattgaaaaggaagtagttgggctttttatttcaggtcatcctttagacgaa
tatcgctttgaaatggaaagcttctgcaatactcaagtttctgaattaaacgatttggat
agtttagcttctaaaaatgaagtgaaagtagggggtatagttacttcaatagcgcatagg
caaaccaaaacaggtaaaccttttggtactttaacccttgaagattacggtgggtcattc
acttttttcatgtttggtgatgattacctagccaataagcaattttatgaaaacggttgg
tttatctttatttcaggaagagttgggaagaagccatggggtgatcaagccttagagttt
aaaataagtaaggtggaattactttctgaacttcgagataaacggacgaagagcttagct
atcatgctcgatttaaatgctattacggaagatttaattgtcgaacttgataatttatgt
cagacttttaggggagaatgtgaagtgaaattggagcttcaagataaagttaatggctat
aaagtggagaccaaatcgagaaagtataaagtaaatcctagtaatgaattgatcgaaggt
ttaaacagaatacctgatttgagttatcggatattgacgtaa
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integrated database retrieval system
