Methanosarcina hadiensis: RSJ42_01725
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Entry
RSJ42_01725 CDS
T10775
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mhab Methanosarcina hadiensis
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhab03016
]
RSJ42_01725
Enzymes [BR:
mhab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RSJ42_01725
Transfer RNA biogenesis [BR:
mhab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RSJ42_01725
Prokaryotic type
RSJ42_01725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
XMB89575
LinkDB
All DBs
Position
366872..367888
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AA seq
338 aa
AA seq
DB search
MSSAGKLPSEVERTLVRKSGAWTNPSYGCPPEKRPILEYIEKGVVNIDKPSGPTSHEVAA
WVKTILGVHTAGHAGSLDPKVTGLLPTLLGKATLAVPALRLSGKEYICHLKLHRAMPQKL
VRQVCEEFTGPIYQMPPIKSAVKRVIRVRTIYYIEVLEIEGTSVLFRVGCEAGTYIRKLC
HDIGLALGCGGHMQGLRRTKAGPFTEKTLVTLHELKDAYAFWKEDGDESGLRRVIMPMES
AVSHLPKIILRDSAVDAICSGASLAVPGITSLDSNLSKGELAGLFTLKGELVALAKAEMT
TEEILKASAGIAASPIRVLMEAGTYPKGWTKKEEKVQL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgccggcaaactgccatccgaagttgaaagaacccttgtccggaagtccggc
gcctggacaaatccatcctacggctgccctccggaaaagcgccccatacttgagtatatc
gaaaaaggggtggtgaacattgacaagccaagcggacctacaagccatgaggttgcagcc
tgggtaaaaactatccttggagtacatacggcagggcacgcaggttctcttgatcccaag
gttacagggcttctgcccacgcttctcggaaaagctacccttgccgtgccagccctacgc
ctgtcaggaaaagagtacatctgccatttgaagcttcacagggctatgcctcaaaagctg
gtccgccaggtctgcgaggaatttacgggtcccatttaccagatgcctcctataaaatcc
gctgttaaacgggtcataagggtaaggacgatctattacatcgaggtgcttgagattgaa
ggcacatctgtactcttccgtgtcgggtgtgaagcagggacttatatcaggaaactctgc
cacgatatagggcttgctctgggctgcggcgggcatatgcagggactccgcaggactaag
gcaggcccgtttacggaaaaaacgctcgtcactctccacgaactgaaagatgcttatgcg
ttctggaaagaagacggggatgaatccgggttgagaagggttataatgccaatggagtct
gccgtatcccacctccccaaaattattctgcgggacagtgcggtggatgctatctgttca
ggtgcttctcttgcagttccgggtattacatctctcgattccaacctttctaaaggagag
cttgcagggcttttcaccttaaaaggagaacttgttgcacttgcaaaggctgagatgacc
acggaagagatcctcaaagcttctgcgggtattgcagcttctcctatccgcgtgcttatg
gaagcaggaacttacccaaagggctggactaaaaaagaagaaaaggtccagctctaa
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