Methanosarcina hadiensis: RSJ42_02070
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Entry
RSJ42_02070 CDS
T10775
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mhab Methanosarcina hadiensis
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhab03400
]
RSJ42_02070
DNA repair and recombination proteins [BR:
mhab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RSJ42_02070
Archaeal homologous recombinant proteins
RSJ42_02070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
XMB89636
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All DBs
Position
441652..443553
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AA seq
633 aa
AA seq
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MDREIRILHTADTHLGYRQYHNEVRRQDFFKAFETVIKDAVDMQVDAVVHAGDLFDSRNP
TLEDLLETMNVLSRLKAANIPFFGIVGNHESKQSTQWLDLFEEMGLAARLGKKPQVVGDV
AIYGIDSVPKSRIPLYDYSGFEIPESLSENCRRLLVMHQIVQPLPFADWDCAEVLGNLPF
KVDAILLGDYHEYEKKKEGEAWITYSGSTERNSASEKEPRSYSIITLSGEGLEISRRTIP
TRDFIFIQAKLYGEEKPFEQISSAVNEHLEEIPESVVFLDISGDSGSVLSFSEIEEYVLG
KGALVVANVNDSRTKDGVPEEVIKVAFTDPDRAVAEEIRKMSLNDGGLIIDEVIRSPDVP
RSRVDEETENRLVGLIEAIDFKDPDFMIKIPVNPDCVSPVPASPASSTAIVRPEKIEPAN
AAEQIEPPGPAGGTESVAAAFEKSEILMSPVRIQRSESLNESLSKSFGVPDETPGPDHIS
FINENSGPDENAEYAESAESAESAESLSLSETAQETLKITAEAQPEGNEEKTDFRTETGN
ISETEAGKFSGHGAEPVPEKEGVDKAEKLPDEKPTDEKSMDEKPVDEKSVDEKPLEDKPA
RVPDKAAKPVKQSHKKGKEKSAVPRQYNLGDYL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggaaataaggatacttcacacagcagacacgcacctgggataccggcagtac
cataatgaggtacggaggcaggacttttttaaggcttttgagactgtcataaaggatgcg
gttgacatgcaggttgatgctgtcgtgcatgcgggagaccttttcgattcgagaaacccg
acccttgaagaccttcttgagactatgaatgtcctgtcccggttaaaggctgcaaacata
cctttttttggaatcgtcgggaaccacgagagcaagcaaagtacccaatggctggacctc
tttgaggaaatggggcttgcggcaaggctcgggaaaaaaccgcaggtggtcggagatgtc
gcaatctacggaattgacagcgtcccaaaatcaagaattcctctttacgattattcaggg
tttgagattccggaatctctgtcggaaaattgcaggagattgcttgtaatgcaccagata
gtgcagcctcttccgtttgcggattgggactgtgctgaggtacttggaaacctccctttt
aaggttgatgcgattctccttggggactaccacgagtacgagaaaaaaaaggaaggagag
gcctggatcacctactcgggcagtaccgaacgcaacagtgcatccgaaaaggaaccgcgt
tcttacagcattatcactctttccggggaagggctggaaatcagcaggaggaccatccct
acccgtgacttcatttttattcaggcaaaactctacggggaagagaagccctttgaacag
atttcttctgccgtaaatgagcaccttgaagagatcccggaatcagtggtgtttctggat
atttcaggagattcgggttcggttctttctttcagcgagatcgaagaatacgtgctgggc
aaaggagctctcgtagtggcaaatgttaatgactccaggacgaaggatggggttcccgaa
gaagtcattaaagttgcgttcacagatcctgacagggctgttgccgaagagatccgcaag
atgagcttaaatgacggcgggctgataattgatgaagttatccggagcccggatgttcca
aggtcaagggtagacgaagaaacagaaaaccggcttgtgggtttaattgaagcgatagac
ttcaaagacccggattttatgataaaaatccctgtcaatcccgattgtgttagccccgtt
cctgctagccctgccagctccactgcaattgtaaggcctgaaaaaatcgaacccgcgaat
gcggctgaacagattgagcctcccggacctgcaggtgggactgaatctgtggcggcagct
ttcgaaaaatctgaaatcctgatgtctcctgttagaattcaaaggtccgaatctcttaat
gaatctctcagtaagagttttggagttcctgatgaaactcccggacctgaccacatttcg
tttataaatgaaaactctggaccagatgaaaacgctgaatatgctgagtctgctgagtct
gctgagtctgctgaatctctatctttatccgagactgctcaggaaactctcaaaattact
gcagaagctcaacctgaaggaaatgaagaaaaaaccgacttcaggacagaaaccggaaat
atatccgaaacggaggctgggaaattttcagggcatggggcagaaccagttcctgaaaaa
gaaggagtggacaaagccgaaaagcttccggatgaaaagcccacggatgaaaaatctatg
gatgaaaagcctgtagatgaaaaatctgtggatgaaaaacctctggaagataagcctgcc
agggttccggataaagccgcaaaaccggtaaagcagagccataaaaaaggaaaagaaaaa
tctgccgtccccagacagtacaaccttggtgattacctgtga
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