Methanosarcina hadiensis: RSJ42_02295
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Entry
RSJ42_02295 CDS
T10775
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mhab Methanosarcina hadiensis
Pathway
mhab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RSJ42_02295 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhab03021
]
RSJ42_02295 (rpoB)
Enzymes [BR:
mhab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RSJ42_02295 (rpoB)
Transcription machinery [BR:
mhab03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
RSJ42_02295 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_45
DUF1451
DmmA-like_C
Motif
Other DBs
NCBI-ProteinID:
XMB89681
LinkDB
All DBs
Position
complement(505062..506876)
Genome browser
AA seq
604 aa
AA seq
DB search
MAKAKVFINGELVGTHDNPAELVEELRKMRRQGFISRQVNIALNDSTREVIINSDMGRAR
RPLLVVENGVPKVTEEHVQKLRSKEIVFDDLVKEGCVEYLDAEEEENAYIALYEADITDK
HTHMEIDPELMLGICTGMVPYPEHNASPRNTMGAAMIKQCIGVSTANQKLRPDTRAHVLH
YPQRALTRTRTSEAIGFDDRPAGQNFVVAVLSYEGYNIEDALIFNKGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEYRGARSADAYANLDIDGLVNPETPVGPNDVLIGKTSP
PRFLEEPSDFGIAVEQRRESSVTMRSNETGIVDTVILTESINGTRLAKVKVRDERIPDIG
DKFASRHGQKGVIGLKVPIADMPFTESGLTPDLMINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVNATAFSGENEEDLREALKKHGFAHTGKEIFYDGATGRMIPADVFVGVILYQKLHH
MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK
VVELVCSHCGMIATFDKQRNVAFCSACGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLNL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcaaaagtattcataaacggagagctcgtcgggactcatgacaaccctgcg
gaactcgtagaagagctcagaaaaatgaggcggcagggattcatatccagacaggtcaat
atagctctaaatgacagtaccagggaagtaattataaactccgatatggggagggcaaga
agacctctcctggttgtggaaaatggcgttcccaaagtgaccgaggaacatgtgcagaaa
ttgaggagcaaggaaatcgttttcgacgaccttgtaaaagaaggctgcgtagagtacctt
gatgctgaagaagaagaaaatgcatatattgctctctacgaggctgacattacggacaag
cacacccatatggagatagatcccgaacttatgttagggatctgtacgggaatggtccct
tacccggaacacaatgcatctccgcgtaataccatgggtgcagccatgatcaagcagtgt
atcggagtctccactgcaaaccagaagttaagacctgatactcgtgcccacgtccttcac
tatccgcagagagcgcttacaagaaccagaacttctgaagcaataggtttcgatgacaga
cccgcaggccagaactttgtagtagcagtcctgtcttatgaagggtataacattgaggac
gccctgattttcaataagggttcaatagaaagagggcttgggagaagccacttcctcagg
acctttgaaggtgaagaaagaaggtatcctggcgggcaggaagacaaattcgaaattcct
gactcggaataccgtggagcccgcagcgctgatgcatatgcaaacctggacatagacggg
cttgtgaatcctgagacccctgtaggccctaatgatgtgcttataggaaaaaccagcccc
ccaaggttccttgaagagccttcggatttcgggattgcagttgaacagaggagagaaagc
tctgttacaatgagatccaacgaaacagggattgtggacaccgttatccttacggaatcc
attaacggaacccgccttgcaaaggtaaaggtaagggacgaaaggatccctgacattgga
gacaaattcgcttccaggcacgggcagaaaggcgttatcggcttaaaggtccctattgca
gacatgccgtttacggaatcaggcttaactcctgacctgatgattaacccgcacgcaatt
ccatcacgtatgactgtaggacacgtcctggaaatgattggcgggaaggtaggttccatg
gaaggcaggagagttaatgcaacagccttctctggagaaaacgaagaagacttaagagaa
gctcttaaaaagcacggttttgcccacacaggaaaagagattttttatgatggggcaaca
ggcaggatgatccctgcagatgttttcgttggtgttatcctttaccagaaactgcaccac
atggttacttccaagatgcacgcaaggtcccgcggacccgtacaggtccttacccgccag
ccgactgagggtcgagcaagggaaggaggtctcaggttcggtgaaatggagcgtgatgtg
ctggtagggcacggagctgccatgtccctaaaagaaagattgcttgacgagtctgacaaa
gtggtggaacttgtctgctcgcactgtggaatgattgcaacattcgacaagcagcggaac
gtagctttctgttcagcctgcggtgctgacactgatatataccctgtagagatgagctat
gcgttcaagctgttactggacgaaattaagtccctcggagttgctcccaggcttaacctt
gaagatgctgtataa
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