KEGG   Methanosarcina hadiensis: RSJ42_02455
Entry
RSJ42_02455       CDS       T10775                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mhab  Methanosarcina hadiensis
Brite
KEGG Orthology (KO) [BR:mhab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mhab02048]
    RSJ42_02455
Enzymes [BR:mhab01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RSJ42_02455
Prokaryotic defense system [BR:mhab02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RSJ42_02455
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII DEAD nSTAND3
Other DBs
NCBI-ProteinID: XMB89710
LinkDB
Position
551361..554489
AA seq 1042 aa
MSIGKPERATQDRIISLFHDELGYSYLGNWIDREGNSNIEEELLAAYLTNNGYTSNQIGV
ALHVLKNAANRHNQSLYANNQAVYSLLRYGVPVKTEAGKVTGSVQLINWQEPEKNYFAIA
EEVTLRGNRERRPDIVLYVNGIAVGVLELKNSRVTIGDGIRQSLSNQQPEFNEWFFRTVQ
FIFAGNDSEGLRYGAIGTQEKYFLTWKEDEEDNSRYKLDKYLLRMCSKNRLIELMYDFVL
FDGGVKKLPRVHQYFAIKAAQKHVRQHRGGIIWHTQGSGKSIVMVLLARWILENYPNARV
VIVTDRDELDKQIEGIFLDAGEPIIRTTSGRELMSQLSQAKPRLLCSLVHKFGRKSANDF
DAFIKDLESQPSKTVGEVFVFVDECHRTQSGKLHRAMKAIMPNAVFIGFTGTPLLKKDKQ
TSLEVFGGYIHTYKFSEAVEDKVVLDLVYEARDIDQRLGSEQKIDAWFEAKTKGLNDWQK
DELKKHWGTMQKLLSSRSRMDRVVNDIIFDFSVKPRLSGERGNALLVASSIYEACKYYTL
FQKTPFKGKCAVVTSYNPQAQDVTKEDTGANTETEKEFIYNTYTELLKNIETTPGMTKTE
TYEDKAKSLFIKEPANMKLLIVVDKLLTGFDAPPCTYLYIDKSMQDHGLFQAICRTNRLD
GEDKDFGYIVDYKDLFKNLVNDRGTGALQVYSSELDRSAGGADPEVLMQDRLKKGRERLD
NALEVLALLCELVEPPKGELEYIHYFCGNTEIPTDLQEHETQRAALYKATASLVRAYANI
SDELEATGYSGSDITRIKKLLEHYLNIREIIRRASGESLDLKAYEADMRHLIDTYIEAAE
PRKVSSFEDMPLLELIVKTGIDKAIVTQLGGLKGNRNAVAETIENNVRSKIIREHLNDPA
YYEKMSALLDEIIAARKAKAIEYEEYLKRIADLVKQVEAGHEDDILEALKISPALRALYN
NLQNHGKGFEGQVEENGEYIVPCDQALDLAISLDETVKRVRSDNWRGIEPRERVIKKAIY
DVLNDVDEVERIFLIIKAQKEY
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgagcattggaaaacccgaacgagccactcaggatcggataatctctctttttcatgac
gaacttggctacagctacctcgggaactggattgaccgcgaaggtaacagcaacatagag
gaagaactgctggctgcctaccttacaaataacggttacacttccaaccagatcggcgtt
gcgctccacgtgctgaaaaacgcagcgaaccgccataaccagagcctctacgccaacaat
caggcagtttatagccttctgcgctacggcgtccccgtgaaaaccgaagcgggaaaggtt
acgggtagcgtccagctcataaactggcaggaaccggagaaaaactattttgcaattgct
gaagaagtaaccctcaggggaaacagggagcgccgtcccgatattgtactctatgtgaac
ggcatcgcagtcggcgtgcttgaactgaaaaacagccgcgtgacaatcggagatggaatc
cgccagagcctatcaaaccagcagcctgagtttaacgaatggttcttccgcaccgtgcag
ttcatttttgcaggcaacgattccgaaggcttgaggtacggcgctataggcacgcaggag
aagtatttcctcacgtggaaagaagacgaagaggataacagccgctataagctcgacaaa
tacctgctaaggatgtgcagcaaaaaccggctcatagagctgatgtatgacttcgttctc
tttgacggcggagtgaaaaagcttcctcgtgtccaccagtatttcgctattaaagcagcg
caaaaacacgtcaggcagcacaggggaggaataatctggcatacgcaggggagcggaaaa
agcattgtcatggtgctccttgccagatggattctcgaaaactaccccaatgcccgcgtg
gttatcgtcactgaccgcgatgagctggacaaacagatagaagggatcttccttgatgca
ggggaacctattatacgcaccaccagcggccgcgaactgatgagccagctcagccaggct
aaaccgcgcctcctttgctcccttgtccacaaattcgggcgcaagagcgctaacgatttt
gatgcgttcattaaggatctggaatcccagcccagcaaaaccgtgggcgaggtttttgtc
ttcgtggacgaatgccaccgtactcagagcgggaaattgcacagggctatgaaggcgatc
atgccgaatgcagtctttatcggttttaccggcacgccgcttctcaaaaaggataaacag
acaagcctggaagtctttggcggctatatccatacttacaaattcagcgaggcagtagag
gataaagtggtcctcgaccttgtctatgaagcacgtgacatcgaccagcgcctcggttcc
gaacaaaaaatcgatgcctggtttgaagcaaaaacgaaggggctcaacgactggcagaaa
gacgagctaaagaaacactggggcaccatgcagaaattgctcagttcacgctcccgcatg
gaccgggtagtaaatgatatcatcttcgattttagcgtaaagccccgcctgtccggtgaa
cgcgggaatgcccttcttgtagcatcaagcatctacgaagcctgtaagtattataccctt
ttccagaaaacacctttcaaaggcaaatgtgcagtggtaacctcttacaacccgcaggct
caggacgtaacaaaagaggatacaggcgcaaataccgagacagaaaaagagttcatctac
aacacctatacggaattgctcaaaaatatcgaaaccactccgggaatgacaaagaccgag
acctacgaagataaagcaaaatctctgttcataaaagaaccggctaacatgaaactgctt
atcgttgtggacaagcttctcaccggatttgatgcccctccctgtacctatctctatatt
gacaagtctatgcaggaccacggcctcttccaggcaatctgtcgcaccaaccggctggac
ggcgaagacaaggacttcggttatattgtggactataaagacctgttcaaaaatctggtc
aacgacaggggaaccggagccctgcaggtctactcttccgaactggaccgcagcgcaggc
ggcgccgaccctgaggttttaatgcaggaccgcctcaaaaaaggaagggaacgacttgat
aatgcccttgaggttcttgccctgctctgcgaactagttgaaccgccaaaaggcgaactt
gaatacattcactatttctgcggtaatactgaaatcccaaccgatcttcaggaacacgaa
actcaacgtgctgcactttacaaggccactgcttcgctggtccgtgcctacgccaacatt
tctgacgaactggaagcaacagggtacagcggttcagatatcacccgcattaaaaagctg
ctggagcattatctgaatatccgtgaaatcatccgcagggcgagtggagaaagcctcgac
ctgaaggcttacgaagcggacatgcgccatctcatagacacttatatagaggcagccgaa
cccagaaaagtctcatcttttgaggatatgcccctgctcgaactgattgtaaaaacagga
atcgacaaagccattgtaacccagctcggcggattgaaaggcaacaggaatgctgtcgca
gagactatagaaaacaatgtccgcagcaaaataataagagaacacctgaacgacccggca
tactacgagaagatgtctgccctgctggacgaaatcatagccgccagaaaggctaaagcc
atcgagtatgaagaatacttaaaacggattgctgaccttgtaaagcaggtggaagccgga
cacgaggacgatatcctcgaagcgcttaaaataagccctgcattgagagctctctataac
aacctgcaaaaccatggaaaaggatttgagggccaggtagaagaaaacggtgaatatata
gtaccctgtgatcaggctcttgatctggcaatcagtctcgatgaaacagtgaaaagggtc
agatccgacaactggcgcggtattgaaccccgtgagcgggtaatcaagaaagccatatat
gatgtcttgaatgacgttgatgaggtagagcgtatcttcttaatcataaaggcacaaaag
gaatactga

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