Methanosarcina hadiensis: RSJ42_05705
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Entry
RSJ42_05705 CDS
T10775
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mhab Methanosarcina hadiensis
Pathway
mhab03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
mhab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSJ42_05705 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSJ42_05705 (uvrA)
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Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XMB90294
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Position
complement(1324461..1327466)
Genome browser
AA seq
1001 aa
AA seq
DB search
MKNIIIKGAREHNLKDITVELPRDRLIVITGVSGSGKSTLAFDTIYAEGQRRYVESLSAY
ARQFLGLMNKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARVGTPYC
PVHNIKIESQSPERIADSLSKECEGMVTILAPIVRQKKGTYQQLFRDLNSEGFTRARVNG
EIHRTDDEISLDRYKKHDIEAVIDRLDPSEDRSRLVEACENALQKGEGLLIAVDSEGKDH
LFSSNMACPVCGMAFEELQPRMFSFNSPFGACEACNGLGFKMELDPDLIIPDKSLCIADG
AVAIYRNYLDSYRSQHLAAVAKHFGFDVFTPIEALSERQYNALMYGSDERIHYSMSMKNG
DAQWSHKGTWEGLLPQSERLYSQTKSEYRRKELEKFMQVHPCPKCEGKRLKEKVLAVKIA
GKSIVDVTDLSIVQSIQFFEDLKLPQKEQEIAKQVLKEIRSRLGFLEHVGLSYLTLSRSA
GSLSGGEAQRIRLATQLGSNLMGVLYVLDEPSIGLHQRDNERLIQTLQTLRDLGNTLIVV
EHDEDTIRAADYVLDIGPGAGIHGGYVVAEGTPAEIEKNPESLTGKYLSGEKQIKPPALR
RQSDSFIRLKGCRENNLKDVDVNIPIGLLTVVTGVSGSGKSTLIYDTLYKALTRKINKSS
VTPGEYDELIFDSEIDKVIVIDQSPIGRTPRSNPATYTKVFDAVRQAFAETKEAKIRGYK
NGRFSFNVKGGRCEACQGEGLIKIEMNFLPDVYIECEECKGTRYNRETLEVKYRGKSIAE
VLDMTVEEAAEHFENIPAIKNKLNTLTRVGLGYIKLGQSSTTLSGGEAQRIKLTRELSKK
GTGKTIYLLDEPTTGLHFHDVKKLISVLNGLVTKGNTVVIIEHNLDVIKSADHIIDLGPE
GGHAGGEIIAAGTPEEIAMVPGSYTGHFLAPRLLTNTYPDAGPEPVEAVFEGEEEFETDF
GDLEEDPDVCLEEEPEEFENGTDRVFEGQALQKILVKNKTQ
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatcataatcaaaggggcacgggaacacaacctgaaagacatcaccgtggaa
cttccacgggacaggttaattgtaattaccggtgtctcgggttcggggaaatcaaccctt
gcctttgacaccatctatgccgaagggcagaggcgctatgttgagtcgctctctgcttat
gcgcgtcagttcctggggcttatgaacaagccggacgtggacagcattgaagggctgtct
ccggcaatctccatagaacagaaaaccacatctaaaaacccccggagtactgtggggact
gtcactgagatctatgactacctcaggctactttttgcaagggtagggactccttattgc
cctgtccataatataaaaatcgagtcccagtctccggaaaggattgcggacagcctgagc
aaggaatgtgagggaatggtcacaatcctcgcgcccatagtccgccagaagaaagggact
taccagcagcttttcagggacctcaacagcgaagggtttaccagggcgagggtaaacggg
gagatccacaggacagacgatgaaatctcccttgaccgctacaaaaagcatgatatcgaa
gctgtaattgaccgtctggacccttctgaagaccggtcaaggcttgtcgaagcatgcgaa
aatgccctccagaaaggcgaaggactcctgattgctgtggattcggaagggaaagatcac
cttttctcttctaacatggcatgccctgtctgtggtatggcttttgaggagcttcagcca
aggatgttttctttcaacagcccatttggggcatgtgaagcttgcaacgggctcgggttt
aagatggagcttgatcctgatctcataattccggacaaaagcctgtgcattgctgacgga
gcagttgccatttacaggaattatcttgacagctaccggagccagcaccttgctgctgtt
gcaaagcatttcggttttgatgtctttactcctattgaagccctctcagaaaggcagtac
aacgctcttatgtacggctcggatgaacgcatccattatagtatgagcatgaaaaacggt
gacgctcagtggtcccacaaaggaacgtgggaagggcttcttcctcaatccgaaaggctt
tacagccagacaaagtccgagtacaggagaaaagaacttgagaaattcatgcaggtccac
ccctgtcctaaatgtgagggcaagcgtctgaaagaaaaagtccttgcagtcaaaatcgca
ggcaagtcaatagtagatgttacggacctttccattgtccagtccatccagttttttgaa
gatctgaaacttccacaaaaagagcaggagatcgcaaagcaggtacttaaggaaattcgt
tcccgcctgggcttccttgaacatgtgggactcagttatctcaccctttcgcgcagtgca
ggctcactctcaggtggagaagcccagaggataagactggcaacccagttaggctcaaac
cttatgggcgtgctctatgttcttgacgagccttctatagggctgcaccagagagacaac
gagaggcttattcagactctgcaaaccctcagggatctcgggaatactctcattgtagtc
gaacacgatgaggacaccatccgggccgcggattacgtgctcgatatcggtccgggagca
gggatacacggagggtatgtggtagccgaagggacgcccgcagagattgagaaaaatccg
gaatctctgacaggcaagtacctttccggagaaaagcagataaaacctcctgccctccgc
agacagagcgactcctttatccggctgaagggatgcagggagaacaacctgaaagatgtg
gatgtaaacatacccatagggcttctgacagtcgttaccggagtttcgggttcgggaaag
tccacacttatctacgataccctttacaaagccctcacgagaaaaatcaataaatcaagt
gtaacgcctggtgaatatgacgaacttatctttgattccgaaattgataaggtaatcgtc
atcgaccagagccctataggcaggactcctcgctcaaatcctgcaacctataccaaggtc
tttgatgcggtcaggcaggcttttgccgaaaccaaggaagccaaaatccgcggatataaa
aacgggcgcttctctttcaacgtaaaaggagggcgctgtgaagcctgccagggggaagga
ctgattaagatcgagatgaatttcctgcctgatgtttacattgaatgtgaagagtgcaag
ggtacgcgctacaacagggaaacccttgaagtgaaatacaggggcaagtccattgccgaa
gtccttgacatgactgtggaagaggctgcagagcattttgaaaatatccctgcaattaaa
aataaacttaatactctcacacgtgtagggctgggatatatcaaactcggacagagttcc
acaaccctttcaggaggggaagcccagagaataaaacttacacgggaactctctaaaaaa
ggtacaggaaagacgatatatctccttgacgagcccacgacaggcctgcacttccatgat
gttaaaaaactgatctcagtccttaacgggcttgttacgaaaggaaacactgttgttatt
atcgaacataaccttgatgttatcaagtcagcagaccatataattgacctcggtccagaa
ggaggacatgcaggcggggagattattgcagcaggtacgcctgaagaaattgccatggtc
ccgggaagctataccgggcatttccttgctccaaggcttctgacgaatacatatccggat
gcagggccagagcctgtagaagcagtttttgaaggcgaagaagagtttgaaacggatttt
ggagatctggaagaagacccggatgtgtgtctcgaagaagagccagaggaattcgaaaac
ggaactgacagagtgtttgaagggcaggcacttcaaaagattctcgtgaaaaacaaaacc
caatga
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