Methanosarcina hadiensis: RSJ42_06040
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Entry
RSJ42_06040 CDS
T10775
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mhab Methanosarcina hadiensis
Pathway
mhab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSJ42_06040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mhab02000
]
RSJ42_06040
Transporters [BR:
mhab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RSJ42_06040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Sgo0707_N2
Motif
Other DBs
NCBI-ProteinID:
XMB90360
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All DBs
Position
1416450..1418081
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AA seq
543 aa
AA seq
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MAAFAVINSMSSPAADSEFIGPDFRAAGETGSQGSEELNSPASEELVVAVGTHGGEPETG
FNPITGWGNSREPLVQSTLFKRDSKANLINDLATDYTVIDDGLKWTVTIRDDVKFHDGEP
LTAKDVAFTFNTAANTGGSIDLSMLEKATATDDYTVEFELNDPQSTFINKLVALGIVPEH
AYSAETYGSNPIGSGPYKFVQWDKGQQVIFEANQDYYGQEPYFKKLTMLFMGSDSAFAAA
KAGQVDLAEIPASYANQEVDGMKIVSLDSIDARGISFPMNPNTGKKNENGYATGNNVTSD
PAIRKALNIGIDRQALIKGALNGQGKEEFTGVDKLPWGNKEAIFEDGNIEEAKKILTEGG
WADTDGDGIVEKNGLKAEFTLLYPANAQERQALAVSVGEEAKKLGINIKVEGKSWDEIYS
LCYSTPNVWGYGSLDPTDVYLRYYSKSYDPSTRNNVIMYNNSAVDNYLRTAITSPDQETA
NKNWQLAAWDGTTGFSEKGDASWMWMATINYVYIMDEDLDIGTPKIQPHGADIFGSILEW
KRA
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttgcagttatcaactcaatgtccagccctgcagcagattccgaattcatt
ggtccggatttccgggctgccggagaaacgggatctcagggctctgaagaactgaattct
ccggcatctgaagaactggttgtagccgtagggacccatggaggagagccggaaacagga
tttaacccgattaccggatggggaaacagcagggaacctcttgtccagagcacacttttc
aaaagggacagtaaggcaaatctgatcaacgacctggctacagattatactgttatcgat
gatggacttaagtggaccgttacaataagggacgacgttaagtttcatgatggagagcct
ttaacagccaaagacgtggcattcacatttaacacggcagcaaatacaggtggcagtata
gatttatctatgctggaaaaggcgacagcaaccgatgattataccgttgaatttgagctg
aacgaccctcagtctacctttatcaataaactggtggctcttggcattgtccctgaacat
gcttacagcgctgaaacttacgggtccaatccgataggttcgggcccatacaaatttgtg
cagtgggacaaagggcagcaggtaatctttgaagcaaatcaggattattacggacaggag
ccgtactttaaaaagttaacaatgctttttatggggtcggactctgcttttgcagcagca
aaggcaggacaggtcgatcttgctgaaattccggcatcttatgccaatcaggaagtagat
gggatgaaaatcgtctctctcgactctattgatgcccgtggaatcagcttcccgatgaat
ccgaatactggcaagaaaaatgaaaacggctatgcaactggaaataacgtaacttctgac
cctgcaataagaaaagccctgaatatagggatagataggcaggcactgattaaaggggcc
ctgaacggacagggaaaagaagaatttacaggcgtggacaaactgccctggggtaataag
gaagctatcttcgaagacggaaatatagaggaggcaaagaaaatcttaaccgaaggcggt
tgggctgatactgacggagacggcattgttgagaaaaacggattgaaagccgaatttacc
ctcctgtatcccgcaaatgcacaggaaaggcaggcattagcggtttctgtgggtgaggaa
gctaaaaaactgggtataaacattaaagttgagggcaagagctgggatgaaatttactcc
ctttgctattcgactccaaatgtctggggttacggatcactggacccgactgacgtatac
ttaagatactatagtaagagctacgatccctcaacccgtaacaacgtaataatgtataac
aattctgctgtggacaactaccttagaacagccataaccagtcctgaccaggaaacagct
aataaaaactggcagctggctgcatgggatgggacaacaggattttccgaaaaaggggat
gcttcctggatgtggatggcgaccattaattatgtctacataatggatgaagacctggat
atcggaactccaaaaatacagccccatggggcagatatctttggcagcatcctggaatgg
aaacgggcatga
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