KEGG   Methanosarcina hadiensis: RSJ42_08775
Entry
RSJ42_08775       CDS       T10775                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
mhab  Methanosarcina hadiensis
Brite
KEGG Orthology (KO) [BR:mhab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mhab02048]
    RSJ42_08775 (cas8c)
Prokaryotic defense system [BR:mhab02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    RSJ42_08775 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1 CC2D1A-B_DM14 FMP33
Other DBs
NCBI-ProteinID: XMB90867
LinkDB
Position
complement(2068577..2070460)
AA seq 627 aa
MIIQSLCCHYDVLEGDENVNIPKLGYSNAKVSFALVISLDGVLSHIVELRSDDKKPKPKD
MDVPIQKSRSSGVFPYFVCDNAKYVFGVEKVKRSEFEKKFNFASSEENSLEHTILEETDK
EVTLVHRRSRECFEAFKTLHHSILDGLNDLGVRGFLAFLDRWNPEDFFENPKTREYKDDL
LAGGNCIFECNGSFLHQNSAVRNAWEAYSQNETGNTFAQCLISGKVEPVSKIHQKIKGVV
GAQSAGASIVSFNNDAFCSYGKEQSFNSPISESAMFRYTTTLNYLLSSPGNRIRIADTTV
VFWAETHEKSCEDLAKFFFDPVEPDTKEKKNVEYSRVQDLNKTKQIEDILNKVRIGKKVN
QEDIGTDPETSFYILGLSPNNARLAVRFWYVDSIGNLIEKVARHHLDMEVIRDDYGPRYV
SVHRLLNETVPQSSDKKTISPLFGGLIMRSILTNTGYPISLYSAILSRVKVDGSINFVRA
GFIKAYLLRLSRTGLSNLNQDLITMSLNEESSNVPYRLGRLFAALEKAQNDTNREMKSTI
NSKYFSSASSTPAVVFPVLLKLAQHHIAKSEWGFRSNQLIEQILAGVNEFPAYLNLEDQG
MFMLGYYHQRKAFFTKKEVAANEEMSL
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgatcatccaatcactctgctgccattacgatgttcttgaaggagatgaaaacgtcaat
attccaaagctgggatatagtaatgctaaggtctcatttgcccttgtcatttcccttgat
ggcgttctgtcacatattgttgaactgagaagtgatgacaaaaagccaaagcccaaagat
atggatgttcctatccagaaatcccgttctagcggggtttttccatattttgtctgtgat
aatgcaaagtatgtttttggtgtagaaaaagtaaaaagaagtgaatttgagaaaaaattt
aattttgcctcgtctgaagagaattctcttgagcatacgatattagaagagactgataaa
gaagtaactcttgtccatcggcgttccagagagtgctttgaggctttcaaaacccttcat
catagtatattggatggtcttaatgatctcggagtccggggattccttgcttttttggac
agatggaatccagaagatttctttgaaaatccaaagaccagagagtataaagatgatctt
cttgctggtggaaactgtatttttgagtgtaatgggagttttttgcatcaaaacagtgcg
gttagaaacgcctgggaagcttactcccagaatgagactggcaatacatttgcccagtgc
ctgataagtggtaaagtggagccggtatccaagatccatcaaaagataaagggcgttgtc
ggggcccaatcggcaggcgcttccattgtcagtttcaataatgatgctttctgttcttat
ggaaaagaacagagttttaattctccaatcagcgaatcagcgatgttcaggtatacaact
accctgaattaccttctttcaagtcctggcaacaggataagaattgctgatactacagtt
gttttctgggctgaaacacatgaaaagtcatgtgaagatcttgcgaaattcttttttgac
cctgttgaaccggatacgaaagagaaaaaaaatgtagagtattctcgggtacaggaccta
aacaaaaccaaacagatagaggacattctcaataaagttcgaatcggcaaaaaagtgaat
caagaggacattgggacagacccagaaacgagtttctatatccttggtttgtctcctaat
aatgcacggcttgcagtacgtttctggtatgttgacagtattgggaatttgattgaaaaa
gttgcccgtcaccatctggacatggaagttatcagagatgattatggtccacgatacgtt
tcagtacatcgcctgttgaatgagacggttcctcagagttcagataaaaaaaccatttcg
ccactctttggtggcctgattatgcgttcgatcttgaccaatacgggctatcctatctca
ttatatagtgcaatcctgagccgtgtgaaagtagatggctcaataaattttgtcagagct
ggttttatcaaagcatacttgctcagactgagcaggacgggattatcgaatttaaatcag
gatttgattaccatgagtttaaacgaggaaagttcaaatgtgccatatcgacttggaagg
ttatttgcagctcttgaaaaggcacagaatgatacgaacagagagatgaagagcaccatc
aacagcaaatactttagcagcgcttcgtcaacgcccgcagttgtgtttcctgtgctgtta
aaacttgcacaacaccacattgcgaaatccgagtggggcttcaggtctaaccagttaatc
gaacagatcctggcaggtgtgaatgagttccctgcatatctgaaccttgaagatcagggc
atgttcatgcttggttactatcaccagcgtaaggcttttttcacgaaaaaagaggtcgca
gcaaatgaggagatgtcgttatga

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