Methanosarcina hadiensis: RSJ42_09215
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Entry
RSJ42_09215 CDS
T10775
Name
(GenBank) PKD domain-containing protein
Organism
mhab Methanosarcina hadiensis
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NCBI-ProteinID:
XMB87515
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Position
complement(2183756..2188717)
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AA seq
1653 aa
AA seq
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MTFNKALWITALALLILVSTAGASSFAYVTNGESDNISVIDTTTDRVVTTISAGSSPLGV
AINPDGTKVYVANAHSNDVSVIDTATNNVTATVRVGSSPQGIAVSPDGKRVYVANLGGNT
VSVINTVSNSVISTVKMGRNPTGIAVSPDGKKVYVTNYGDKNVSIIDTATNKVTATVSVG
KGPREIVVAPDGARAYVANSDSGSISVIDTITNSVTGTIKVNGAPSGVAVNPEGTRVYVS
NNDKYFSTVSVIDTSSNTVTATMPVGPNPSGISVTPDGKKVYVAINLCNAVSVIDTATNT
VTSTMLAGKGTYASGRFIGSIPVHPVYPSADFSTNTTLDYVFLSSPVQFKDLSENATRWK
WDFGDGTSSTNKNPTHSYSEPGVYTVSLTVSNSNGTDSKTATLSAVKKGSLSPSYSFITN
INSNTVSVINTENNNLTATVPVGISPIGVAFSPDGKNVYVTNAHYNRKGSVSVIDTAINK
VTATIDLGDKYGPYGIAATPDGKKLYVANRDINGVSVIDTSAKTVIATVPAGKWPMGVAA
SQDGTKVYVTNRYSNNVSVIDTGTNAVIDSVKVETGPCGIAVSPDGAKIYVSNCESRTVS
IIDTDSNTVTASVPVEEWPMGVAVSPDGTKAYVANQRSNNVSVIDTATKTVVASVKVGRN
PYGISVTPDGTKVYVANCGDDEHLGNTVSIIDTATNRVITTEKTGYSPAAFGQFISPLPA
QPLLPAANFSINLTTGYAPLSVQFTDFSKNADGWKWDFGEGSGSTKQNEVHTYSRAGNYN
VTLTVNNANGTDSKFATVTVLAQPVFSASATSGRSPLSVSFTDLSTGSPASWNWTFGDGT
YSTEKSPVHSYKKPGRYSVTLTLNETGNRTAVTKSNYIIVSNGFEAPVADFSASQTSGKT
PLTVQFTDQSTGSPTSRKWNFGDGTRSIAQSPVHTYGEAGLYTVTLTVSNEYGSNTLTRS
RYIIVSNALSSPAVSFSASPAFGKAPLTVDFTGQGKGSPTSWKWSFGDGNNSEDKNPVHI
FDKPGLYSVRVTAGNEKGSNTLTKTGYVAVSGTANIPAARFSSSPSSGKAPLTVRFTDKS
TGSPTAWKWYFGDGTNSTEKNPVHTYNESGLYSVSLTASNANGSNALTKTGFIAVSGVSL
APPVTSFSASPASGKAPLTVSFTDESKGSPTSWKWSFGDGNNSEDQNPAHIYNTPGNYTV
ALTATNEGGSNRVQISRYISVVSGNSTAMPSSGTVPITAFSATQTIGSAPFTVSFTDEST
GSPTSWKWTFGDGGNSTEKNPVYTYNKPGRYNVTLTASNANGGNALTKFGYVYVSGDLNA
PVSRFSASPASGKTPLTVRFTDESTGSPSSWRWTFGDGSNSIEQNPVHTYNKSGQYTVSL
TASNTNGSNTLTKLRFIAVSSVSDAPVTNFSASPASGKAPFTVRFTDQSTGSPTSWKWTF
GDGGNSTEKDAVYTYNKSGLYSVTLTASNDNGSNVLTKTSYIAVSDALKTPVANFSASHT
SGKAPLTISFTDESTGSPSSWRWTFGDGGNSTEQNPVHTYNKSGLYSVALTANNENGSNT
LARTGYIAISNPLVAAFSASPASGPVPLSVSFIDNSTGSPDSWTWAFGDGNTSTEKNPIH
VYDRTGQFTVSLTVNNSGNTSTETRSRYIVVNK
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgacctttaataaagctctctggataacggcacttgctcttctaattctggtgagtact
gcaggtgcttcgtcatttgcatatgttaccaatggggaaagtgacaatatctctgtaatt
gacacgacaacagacagagttgtgaccacgatatcggcagggtccagccctctgggagtt
gcaattaatcctgatgggacaaaagtatacgtggcaaatgctcatagcaacgatgtatcc
gtaattgatacggcaacaaataatgttacagctaccgtgcgtgtgggcagttctcctcaa
ggaattgcagtcagcccggatggcaaaagggtatatgtagcaaacctgggcggcaacacc
gtttctgtaattaatactgtttctaactctgttataagtacagtaaaaatgggaaggaat
cctaccggaatagctgtgagccctgatgggaaaaaggtatatgtaaccaattacggggac
aaaaatgtctctatcattgatacggctacgaataaggttacagccacagtctccgtagga
aaaggtccaagggaaattgtggtcgcaccggatggagccagagcatatgtggcaaactct
gacagcgggagtatttctgttattgacacaataacaaatagcgttacaggtacgataaag
gtaaatggagctccttccggggttgcagtcaacccggaaggaaccagagtgtatgtttct
aataatgataagtatttcagcactgtctctgtaattgatacttcttcaaatacagttaca
gctacgatgccagtcggaccaaatccatcgggaatttcagtcactcccgatggaaaaaaa
gtatacgtagcaattaacctctgcaatgctgtttctgtaattgacactgcaaccaacact
gtcacatcaacaatgcttgcaggaaagggcacttacgcttcaggcaggtttataggttct
atccctgtacatccggtttatccttcagctgacttcagcaccaataccacattagattac
gttttcctttcttcgcctgttcagtttaaagacctgtccgaaaatgcaacaaggtggaaa
tgggactttggagatggaaccagctctacaaataagaatcccactcattcctactctgag
cccggggtctatactgttagccttacagtaagtaattcaaacggcacggattcaaagact
gcaacattaagtgctgtaaagaaaggttctctttcgccttcatactcatttattaccaat
attaacagcaacactgtttcggtaattaatacggaaaataataacttaacagccaccgtg
cctgtaggaattagcccgataggagttgcattcagccctgacggtaaaaatgtatatgta
acgaatgcccactacaatcgcaaaggttctgtctctgtaattgatacggctataaataaa
gttacagctaccatcgatttaggagacaaatacggcccatacggaattgcagccacaccg
gacgggaaaaagctgtacgtggcaaatcgtgatatcaacggcgtttccgtaattgacacg
tctgcgaaaactgttatagccacggtgcctgcaggaaaatggcctatgggagttgcagcc
tcacaggacggaacaaaggtatacgtgactaaccgttacagcaataatgtctccgtaatt
gacacaggcacaaatgccgttatagacagtgtcaaagttgaaacaggtccttgtgggatt
gcagtcagcccggatggggcaaaaatatatgtctcgaactgtgaaagcaggactgtttct
ataattgatacggattcaaacactgttacagccagcgtgcctgtagaagaatggcctatg
ggagttgcagtcagtccggatgggacaaaagcatacgtagcaaaccagcgcagcaataat
gtctcagtgattgacaccgcaacaaaaactgttgtagcttctgttaaagttggaagaaat
ccttacggaatctcagtcacaccggacgggacaaaggtatatgtagcaaactgcggagac
gatgaacatcttggaaacactgtctctataattgacacagccacaaacagggttataact
acggaaaaaacaggttacagtcctgctgctttcggccagtttataagtcctctgcctgca
cagccattacttcccgctgcaaacttcagcatcaatctcacaaccggttatgctcctctt
tctgtccagtttacggatttctctaaaaatgctgacgggtggaaatgggactttggagag
ggatccggttcaacaaaacaaaatgaggtgcatacctactccagggcagggaattataat
gtaacgcttacagtgaacaacgctaacggcactgattcgaaatttgccacagtaaccgtc
ctggcacagccggtattttccgcctcagcaacttcaggaagatcgcccctcagtgttagt
ttcactgatctgagcacaggatcgccggcatcgtggaactggacttttggggatgggact
tattcaacggaaaagagccctgttcatagttataaaaaaccaggaagatattccgttact
ttgacattaaacgaaaccgggaacaggactgcagtaacaaaatccaattatatcatagtc
tcaaacggttttgaagccccagttgctgacttttctgcgtctcagacctcaggaaaaacg
cctcttaccgttcaatttactgaccagagcacgggatctccgacctcaaggaaatggaat
tttggagacggtacacgttcaatcgcacagagccctgtacatacatacggggaagcagga
ttatacactgttacattaacagtaagcaatgaatacggaagcaatacgttaacaagatcc
agatatattattgtttcaaacgctttaagcagtcctgcagtcagcttctctgcatctcct
gcttttgggaaagcacctcttactgtcgattttaccggacagggaaaaggatctccaacc
tcatggaaatggtcttttggagacgggaataactcagaagataaaaatcctgtacatata
ttcgataaaccaggactatattctgtcagagtgacagcaggtaatgaaaaaggcagtaac
acattaacaaagaccggttatgttgccgtctcaggcactgcgaatatccctgccgccaga
ttctcttcgtctccatcttcaggaaaagcacctcttaccgttcgattcactgacaagagc
acaggctctccaactgcctggaaatggtacttcggagacggaaccaattcgacagagaag
aatcctgtacacacatacaatgagtccggattatattccgtttcattgacagcaagtaat
gcaaacggaagtaatgcactgacaaaaacagggtttattgctgtatcaggtgtttcgtta
gcacctccagttaccagcttctctgcatctcctgcctccggaaaagcgccgctgaccgtt
agttttactgacgagagcaaaggatctccaacctcatggaaatggtctttcggagacggg
aataattccgaagaccagaatcctgcacacatatacaatacaccaggaaattatactgtt
gctttaactgcgaccaatgaaggaggaagcaacagggtacagatatccaggtatataagt
gtagtttccggaaacagtactgcgatgccgagttcaggaactgtccctatcactgctttc
tcagcaactcaaactatagggagtgcgccttttactgtcagttttactgacgagagcaca
ggatctccgacttcgtggaaatggactttcggggatggaggcaattccacggaaaagaat
cctgtatacacatacaataaaccggggagatataatgttacattgacagcaagtaatgca
aacggcggcaatgcattgacaaaattcggatatgtttatgtttcaggcgatctgaatgct
cctgtttccagattctctgcatctccggcttcaggaaaaacaccgcttaccgttcgcttt
actgacgagagcacagggtcaccatcctcatggaggtggactttcggagacggaagcaat
tccatagaacagaaccctgtgcacacatataataaatcagggcaatacactgtttcattg
acagcaagtaatacaaacggaagtaatacgttgacaaagttaagatttattgctgtatca
agcgtttcagatgctccagtcaccaatttctctgcgtctcctgcttcaggaaaagcgcca
tttacggtccgttttactgaccagagcacaggttctcccacttcgtggaaatggacattc
ggggatggaggcaactccacggaaaaggatgctgtatacacatacaataaatcgggactt
tattccgttacattgacagcaagtaatgataacggcagtaatgtgttgacaaaaaccagc
tatattgccgtgtcggatgctttaaaaactccagttgctaatttctctgcgtcccatacc
tccggaaaagcgcctctgaccatcagttttactgacgagagcacaggttctccatcctca
tggaggtggactttcggagacggaggtaattcgacagaacagaaccctgtgcatacatac
aataaatcgggactttattctgttgcgttgacagcaaataatgaaaatggcagcaatact
cttgcaagaacaggttatattgctatttcaaaccctcttgtcgctgccttttccgcatct
cctgcttcagggcctgtgccgctcagtgtaagttttattgacaacagcacaggatcaccg
gattcatggacatgggcttttggggatggaaacacatcaacagaaaagaatccgatacat
gtatacgatagaactggacaatttactgtcagtttgacggtaaataattccggaaatacc
agtactgaaacgaggtccaggtatattgtagttaataaatga
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