Methanosarcina hadiensis: RSJ42_10215
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Entry
RSJ42_10215 CDS
T10775
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
mhab Methanosarcina hadiensis
Pathway
mhab00750
Vitamin B6 metabolism
mhab01100
Metabolic pathways
mhab01240
Biosynthesis of cofactors
Module
mhab_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
RSJ42_10215 (pdxS)
Enzymes [BR:
mhab01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
RSJ42_10215 (pdxS)
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Motif
Pfam:
SOR_SNZ
ThiG
DUF561
IGPS
NanE
TetR_C_27
NMO
P_C10
Motif
Other DBs
NCBI-ProteinID:
XMB87707
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Position
complement(2423061..2423957)
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AA seq
298 aa
AA seq
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MDFEKLRHGTELIKRGFARMQKGGVIMDVTTPEQARIAEEAGAVAVMALQAVPADIRKAG
GVARMADPEIVQQIIDTVTIPVMAKARIGHFVEAEILEALGVDMVDESEVLTPADPFYHI
DKTQFTVPFVCGARNLGEALRRINEGAAMIRTKGEAGTGDVSQAVKHMKQIQGEIRALRG
KTKEELIMVAREIEAPIELVVETSKMQRLPVVNFAAGGVATPADAALMMRLGSDGVFVGS
GIFKAENPEKMAKAIVEAVNNYDNPAKLAEISKGVGAGMKGISADMIPVQEALQERGW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggactttgaaaaattgagacacgggaccgaacttatcaagcggggctttgcacggatg
caaaagggaggtgtgatcatggacgtgacaactcccgaacaggccaggatcgcagaagaa
gccggagcagttgctgttatggcccttcaggctgtccctgcagatataagaaaagcaggc
ggtgtagcccgcatggcagatcccgaaatagtacagcagatcattgatacggttactatc
cctgttatggcaaaagcaaggatcgggcactttgttgaagccgaaattctcgaagcactc
ggcgttgacatggtagacgaatccgaagtccttactcctgccgaccccttctaccacata
gacaaaacacagtttacagtgccctttgtctgcggagccagaaaccttggtgaagccctc
cgcaggattaacgagggcgcagccatgatccggacaaaaggtgaagccggaacaggcgac
gtcagccaggcagtaaagcacatgaaacagatccagggcgaaatccgtgcacttagaggt
aagaccaaagaagagcttataatggtcgcaagggagattgaagcccctatcgagctcgta
gtagagacctccaaaatgcagcgccttcctgtagtgaactttgcagccggcggagttgca
acccctgctgatgcagctctcatgatgcgccttggttcagacggtgtctttgtaggttca
ggaattttcaaagccgaaaaccctgaaaagatggcaaaagcaattgttgaagccgtaaac
aactacgataaccctgcaaaacttgcagagatctcaaaaggcgtgggcgcaggaatgaaa
ggcatcagcgcagatatgatccctgtgcaggaagcccttcaggaacgcggctggtga
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