Methanosarcina hadiensis: RSJ42_11125
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Entry
RSJ42_11125 CDS
T10775
Name
(GenBank) ATP-dependent DNA helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mhab Methanosarcina hadiensis
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhab03400
]
RSJ42_11125
Enzymes [BR:
mhab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSJ42_11125
DNA repair and recombination proteins [BR:
mhab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RSJ42_11125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
Helicase_C
ResIII
DEXQc_Suv3
HTH_61
HHH_2
DUF7898
IMS_HHH_1
HHH_RS2-RL21-YNQ2
DNA_pol_lambd_f
Cdd1
DUF6043
Motif
Other DBs
NCBI-ProteinID:
XMB87880
LinkDB
All DBs
Position
complement(2638082..2640274)
Genome browser
AA seq
730 aa
AA seq
DB search
MKIESLDLSDEIKRFYENSGILELYPPQAKAVEKGLLEGKNLLAAIPTASGKTLLAELAM
LKSVLAGGKALYIVPLRALASEKFRRFQEFSGLGIRVGISTGDYDKRDEGLGINDIIVAT
SEKTDSLLRNETAWMQEISVVVADEVHLIDSPDRGPTLEVTLAKLRRMNPSCQILALSAT
VGNADELAAWLDAELVLSEWRPTDLMEGVFYNGTFYCRDKEKPVEQPTKDEAINLVLDTI
KEGGQSLVFESSRKNCMGFAKKAVSAVKKTLSKEDREALAGIADEILENSETDISSVLAN
CVRAGTAFHHAGLTTPLRELVEDGFRNGKIKLISSTPTLAAGLNLPARRVVIRSYRRYSS
EMGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLLAKSYEELVFLFEKYIEAGAEDIWSKLG
TENALRTHVLSTISNGFARTKEELMDFLEATFFAFQYSNFGLSAVVDECLNFLRQEGMLE
KDPDILVSTVLGKLVSRLYIDPLSAALIAKGLREAGTLTELTLLHLICSTPDMRLMYMRS
QDYQEVNDYVMAHAGEFSRIPDPFNIAEYEWFLGEVKTSLLLMDWIHEKPENEICLKFGI
GEGDIHSTADIAEWIMHVAAQLAGLLGLKGAKEATELEKRIRYGAAPELMDLLDIRSVGR
VRARKLYEAGFKTTAELAAASPEQIAALVGPKIAERIFKQIGRKGTAPESTTTEPLEKGS
PEGQRTISDF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaaagtctcgacctgtccgatgaaataaaacggttttacgaaaactccggg
atccttgaactttaccctccccaggcgaaagctgttgaaaagggcctgcttgaagggaaa
aacctgcttgctgcaatccctacggcttcgggaaagactctgcttgcagagcttgcgatg
ttgaagtccgtgcttgcaggaggaaaagcgctctatatcgtgcccctgagagctctggct
tccgaaaaattcaggcggtttcaggagttttccgggctgggcatcagggtagggatctca
acaggagactacgacaaacgggacgagggacttggcataaatgatattatcgttgcgact
tcggaaaagaccgattctcttctcaggaacgagactgcctggatgcaggagatctcggtt
gttgtggcagatgaagtccatcttattgattccccggatagggggcctactcttgaagtt
accctagcaaagctcaggagaatgaacccttcctgccagatacttgcactttcggcaaca
gtaggaaatgccgatgaacttgcagcctggctcgatgcagagcttgtgttaagcgaatgg
agaccaacagaccttatggaaggggtgttttataacgggactttttactgcagggacaaa
gagaagcctgttgaacagcccacaaaagacgaagccattaacctcgtgcttgatacaata
aaagaaggtgggcagtcccttgttttcgaaagcagcaggaaaaactgcatgggttttgca
aagaaagccgtatctgcagttaaaaaaactctgtctaaagaagaccgtgaggccctcgca
ggcattgctgacgagatccttgaaaacagtgaaaccgatatctcatcagttcttgcgaac
tgtgtccgtgcagggacagcattccaccatgcaggccttacaacgcctctgagggaactt
gtagaagatggcttccgaaacgggaagataaaacttatctctagcacccctacccttgca
gcagggctgaacctgcctgccaggcgtgtggttataaggagctaccggcgctattcttct
gaaatggggatgcagccaatccccgtacttgaatacaagcaaatggcaggaagggcgggg
aggccaaggcttgacccttacggagaggctgtcctgcttgcaaagtcttacgaggagtta
gttttcctattcgagaaatacattgaagccggagctgaagatatctggtcaaagctaggg
acggaaaatgctctcaggacacatgtgctttcaacgatctccaacggttttgcccggaca
aaagaagagctcatggattttcttgaagcaacctttttcgcattccagtactcaaacttc
gggctctcagctgttgtggacgaatgcctgaactttttgcggcaggaagggatgcttgaa
aaagatccggatattcttgtttccacggttctcggaaaactcgtatcaaggctctatatt
gaccctctctcggcagcccttattgcaaagggactgagggaagccggaaccctgaccgag
cttactcttttgcatctgatctgcagcacgcctgatatgcgccttatgtacatgcggagc
caggactaccaggaagtcaacgattatgtgatggctcatgcaggcgagttctcaaggatt
ccggatcccttcaatattgccgaatatgaatggttcctgggtgaggtaaagacttctctc
ctgctgatggactggatccatgagaagcctgaaaacgaaatatgtttaaaattcggtata
ggggaaggagatatacattctacggcagacattgccgaatggataatgcacgttgcagcc
cagcttgcagggcttcttgggctgaaaggggcaaaagaagccacagaacttgaaaagcgg
atcaggtacggtgcagcccctgaattgatggaccttctcgatatcagaagcgtagggcgt
gtaagggcaaggaagctctatgaagcaggctttaaaactacggcagaactcgcagcagct
tctcctgagcagatagctgcacttgtagggccaaagattgctgaaaggatcttcaagcag
atcggaagaaaaggaacagcaccggaatccactaccactgagcctctagaaaaaggttcc
cctgaagggcagaggacaatcagcgatttctga
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