Methanosarcina hadiensis: RSJ42_11210
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Entry
RSJ42_11210 CDS
T10775
Name
(GenBank) transcriptional regulator
KO
K07728
putative transcriptional regulator
Organism
mhab Methanosarcina hadiensis
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mhab03000
]
RSJ42_11210
Transcription factors [BR:
mhab03000
]
Prokaryotic type
Helix-turn-helix
Other families
RSJ42_11210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_19
HTH_3
HTH_19
HTH_11
MerR
MerR_1
HTH_31
HTH_Crp_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
XMB87896
UniProt:
A0ACH3WC39
LinkDB
All DBs
Position
complement(2659480..2660466)
Genome browser
AA seq
328 aa
AA seq
DB search
MTKEVLIHQIIDVLARAGFALSDRCNIRPRSFDVAARKDDTLLLCKVLFNIDGLNEETAR
EMKYLAEYLGGSAIVVGAKTRDQMLEDSVVYMRYDILALNVQTLHDYFVENIRPLVSAAP
GGLYVSIEGDLLKKARTNHSMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLQLEDIFG
VELAKPIDILKSCGSRKPRKKAEPENEEPKAKPGALLPEDMILNTISMLGYDVLPTAQAP
FKAISRDKSSVILTGVSEFNTTVIKRAHLMSSISCITETQSVFIINGRSKLKSVENTVLI
EKKELDTISDSQELLDFIEERKDTHSGA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagttctcatacatcaaattattgatgtattggcgcgtgcgggttttgca
ctctccgaccgttgtaatatacgcccgaggagctttgacgttgccgcacggaaagatgat
acattactactttgcaaggttttatttaatattgacggcctgaacgaagaaacagcaaga
gagatgaaatatcttgctgagtatcttggaggctccgctatcgttgtaggagccaagaca
agggaccagatgcttgaagacagcgttgtctatatgcgttatgatattcttgccctgaac
gtccagactttacacgactattttgttgaaaatatcaggccgctggtatcggcagcaccc
ggagggctttatgtctccatagaaggagacctcctgaaaaaggcaagaaccaaccattcc
atgtctctcgggacactggcttcaatggtaggggtttcgaggagaactatcagtaaatac
gaagaagaaggcatggatgcgtcgatcgatgttgttctccagcttgaagacattttcggg
gtagaactggcaaagcccatagatatcctgaaatcctgcgggagcagaaagccaaggaag
aaagcagaacctgaaaacgaagagcccaaggcaaaacccggcgcacttttgcctgaagac
atgatcctgaatacaatttcaatgctcgggtatgatgtcctccccacggctcaggcgccc
ttcaaagccatctcaagggataagtcttcagtaatccttacaggtgtgagcgaattcaat
acaaccgtaatcaagagggctcacctgatgagcagcatttcctgcataacggaaacgcag
tccgtgttcataattaacgggcgttccaaactgaaatccgttgaaaacacggtgcttata
gaaaagaaagagctcgatacaataagtgattctcaggagcttcttgatttcatagaggag
cgcaaggacacccacagcggagcataa
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