Methanosarcina hadiensis: RSJ42_12030
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Entry
RSJ42_12030 CDS
T10775
Symbol
spt4
Name
(GenBank) transcription elongation factor subunit Spt4
KO
K15171
transcription elongation factor SPT4
Organism
mhab Methanosarcina hadiensis
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
RSJ42_12030 (spt4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhab03021
]
RSJ42_12030 (spt4)
03019 Messenger RNA biogenesis [BR:
mhab03019
]
RSJ42_12030 (spt4)
Transcription machinery [BR:
mhab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
RSJ42_12030 (spt4)
RNA polymerase I system
RSJ42_12030 (spt4)
Messenger RNA biogenesis [BR:
mhab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
RSJ42_12030 (spt4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
DZR
DZR_2
Prok-RING_4
zf-RING_5
HVO_A0556
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
XMB88049
UniProt:
A0ACH3WCJ4
LinkDB
All DBs
Position
2840193..2840378
Genome browser
AA seq
61 aa
AA seq
DB search
MPEKVCRHCLRVLEGQTCPVCGTSDLAEEWSGLVIILDTERSEIAKRLGVDIPDRFALKV
R
NT seq
186 nt
NT seq
+upstream
nt +downstream
nt
atgccagagaaagtctgtcgacactgccttagggtcctcgaagggcaaacatgtcctgtt
tgcggaacttcggaccttgcagaagaatggagtggacttgttattattcttgacaccgaa
cgctcggaaattgcaaaaagactcggggttgacatcccggatagatttgccttgaaggtg
cgatga
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