Methanosarcina hadiensis: RSJ42_12500
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Entry
RSJ42_12500 CDS
T10775
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mhab Methanosarcina hadiensis
Pathway
mhab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RSJ42_12500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhab03021
]
RSJ42_12500
Transcription machinery [BR:
mhab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
RSJ42_12500
Prokaryotic type
Archaeal type
TFE
RSJ42_12500
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TFIIE_alpha
HVO_2753_ZBP
RepL
Zn_Ribbon_TF
CoiA_N
DUF7838
Motif
Other DBs
NCBI-ProteinID:
XMB88140
LinkDB
All DBs
Position
2942443..2942937
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AA seq
164 aa
AA seq
DB search
MVDLNDKVIRGYLRSLVGDDGLKMIELMPEGDVTDEEIAAKTGVLLNTVRRTLFILYENK
FAIVIRERDSNSGWLTYLWHLDFTDIEHQLMREKKKLLRNLKTRLEFEENNVFYVCPQGC
VRLLFDEATETEFLCPMCGEDLVFYDNSRFVGALKKRVDALSSA
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgatttgaatgacaaggtaatcagaggatacctcaggagccttgtaggggatgac
gggcttaaaatgatagagctgatgcccgaaggcgacgtcacggatgaagaaattgcagca
aaaaccggagttctgctaaataccgtgagaagaactctttttatactatatgaaaataaa
tttgcaatagttataagggaaagagattcaaacagcggctggcttacttatctctggcat
ctggactttaccgatatagagcaccagcttatgagagaaaagaaaaaactgctgcggaat
cttaagactcgccttgagtttgaagaaaataatgtgttttatgtttgcccgcaaggttgc
gttcgcctgctttttgacgaagcaacggaaacggaatttctctgtcccatgtgcggggaa
gacctggtcttctatgacaactcccgctttgtaggagccctgaaaaagcgtgttgatgct
ttaagttcagcataa
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