Methanosarcina hadiensis: RSJ42_13890
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Entry
RSJ42_13890 CDS
T10775
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
mhab Methanosarcina hadiensis
Pathway
mhab03030
DNA replication
mhab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSJ42_13890 (fen)
03410 Base excision repair
RSJ42_13890 (fen)
03450 Non-homologous end-joining
RSJ42_13890 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhab03032
]
RSJ42_13890 (fen)
03400 DNA repair and recombination proteins [BR:
mhab03400
]
RSJ42_13890 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mhab04147
]
RSJ42_13890 (fen)
DNA replication proteins [BR:
mhab03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
RSJ42_13890 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
RSJ42_13890 (fen)
DNA repair and recombination proteins [BR:
mhab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
RSJ42_13890 (fen)
Exosome [BR:
mhab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RSJ42_13890 (fen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
RuBisCO_large
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XMB88397
UniProt:
A0ACH3WDI8
LinkDB
All DBs
Position
complement(3241676..3242692)
Genome browser
AA seq
338 aa
AA seq
DB search
MGTDIGDLLQKRKIELSDLSSQVIAVDAFNTLHQFLSIIRQRDGSPLVNSSGKVTSHLSG
LLYRTASLVEAGIKPVFVFDGKPPEMKSQTLNKRKEVRESSREKWEYAKKEGDLEAAYKY
AQASSKVDQGIIEDSKHLLGVMGIPWIQAPCEGEAQAAHMVLKKDADYVASQDYDSFLFG
APAVIRNLAVTGKRKLPGKNVYVDVELEMIELEETLQALGISRDQLIDIAICVGTDYNKG
LEKVGPKTALKLIKKHGNIHAVLREKGVEIEALDSIKELFTHPDVTDNYEIKWGKPDSER
LITFLCEENDFSVERVEKAAERLKAASGARQRTLDQWF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagatataggagatctgctccagaaaagaaaaatagagctttccgatctctca
agccaggtgattgcagttgacgcatttaataccctgcaccagtttttgagcattattcgc
cagagagacggaagtcctctggttaattcgagcgggaaagtaacttctcacctctccggg
cttctttaccgcacagccagtctggttgaagcaggcataaaacctgttttcgtttttgat
ggcaagccccctgaaatgaaatcccaaaccttgaataaaaggaaagaagtaagggaatcg
tcccgggaaaaatgggaatatgcaaaaaaagaaggggatcttgaagctgcctataaatat
gcccaggcttcttcaaaggttgaccagggcattattgaggattccaaacatcttctcggt
gtgatgggcattccatggatacaggctccctgtgaaggggaggcacaggctgcgcatatg
gtcctaaaaaaggatgcggattatgttgcttcccaggactatgactctttccttttcgga
gctccagctgttatccgcaatctggctgttactggcaaacgaaagcttcctggaaagaat
gtatacgttgatgttgaacttgaaatgattgaactggaggaaacgctgcaggcgctggga
atcagcagggaccagctaatagatatcgcaatctgcgtgggtacggattataacaaagga
ctggagaaagtaggtcccaagacagctcttaaattgattaaaaagcatgggaatattcat
gcagttctccgggagaaaggggtagagatcgaggctctggacagcataaaggaacttttt
acccatcctgacgttacggataactatgaaatcaaatgggggaagccggattccgaaaga
ctaataacgtttctgtgcgaggaaaatgacttctccgtagaaagggtagaaaaagctgca
gagcgccttaaagcggcttcaggggcaagacagagaactctcgaccagtggttctga
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